HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:33.7 nTPM
HPA Brain:33.2 nTPM
GTEx:33.7 nTPM
FANTOM5:19.6 Scaled Tags Per Million
Pig:14.8 nTPM
Mouse:20.1 nTPM
Allen mouse:3.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA023073Antibody HPA023153
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 33.2
Sample id Sample description nTPM
Hippocampus
nTPM: 29.8
1898 Male, age 80, left hemisphere 34.4
1911 Female, age 85, right hemisphere 31.5
1855 Male, age 76, left hemisphere 30.3
2529 Female, age 94, left hemisphere 29.3
2621 Female, age 67, right hemisphere 28.7
2148 Female, age 91, left hemisphere 24.6
Dentate gyrus
nTPM: 29.6
2530 Female, age 94, left hemisphere 34.9
2010 Male, age 76, both hemispheres 32.5
2246 Female, age 85, both hemispheres 30.4
2528 Male, age 74, both hemispheres 29.5
2531 Female, age 67, both hemispheres 26.2
1927 Female, age 91, both hemispheres 23.8
Entorhinal gyrus
nTPM: 32.3
2764 Male, age 80, right hemisphere 36.9
1938 Female, age 85, left hemisphere 34.0
2686 Male, age 75, right hemisphere 33.7
2613 Female, age 94, left hemisphere 30.8
1787 Male, age 76, left hemisphere 29.5
2117 Female, age 91, right hemisphere 28.7
Hippocampus, CA1
nTPM: 29.9
2749 Male, age 80, left hemisphere 34.4
1873 Female, age 85, both hemispheres 34.1
2527 Male, age 74, both hemispheres 28.4
2082 Female, age 91, right hemisphere 28.1
2045 Male, age 76, both hemispheres 24.3
Hippocampus, CA2
nTPM: 30.5
1963 Male, age 80, left hemisphere 36.8
2437 Female, age 94, left hemisphere 33.6
1892 Male, age 76, both hemispheres 31.3
1940 Female, age 85, left hemisphere 29.0
2249 Male, age 74, both hemispheres 28.2
2113 Female, age 91, right hemisphere 24.0
Hippocampus, CA3
nTPM: 29.1
1867 Male, age 76, both hemispheres 34.0
1891 Female, age 85, both hemispheres 32.2
2861 Female, age 67, both hemispheres 28.5
2620 Female, age 94, left hemisphere 28.3
2436 Male, age 74, both hemispheres 26.2
2137 Male, age 80, left hemisphere 25.3
Parahippocampal cortex
nTPM: 29.6
2532 Female, age 72, left hemisphere 38.4
1933 Female, age 85, both hemispheres 33.5
2018 Male, age 76, both hemispheres 32.0
2692 Male, age 74, both hemispheres 30.1
1850 Male, age 80, both hemispheres 28.4
2622 Female, age 67, right hemisphere 28.0
1990 Female, age 91, right hemisphere 27.4
2693 Female, age 94, both hemispheres 26.7
2250 Female, age 67, right hemisphere 26.0
2245 Female, age 91, both hemispheres 25.3
Perirhinal gyrus
nTPM: 26.5
1841 Female, age 85, right hemisphere 28.0
1794 Male, age 80, right hemisphere 27.0
1847 Female, age 91, left hemisphere 26.9
2848 Male, age 76, right hemisphere 26.6
2521 Female, age 94, right hemisphere 23.9
Subiculum
nTPM: 33.2
2438 Female, age 94, left hemisphere 39.9
1901 Male, age 80, both hemispheres 36.6
1977 Female, age 85, both hemispheres 35.8
2042 Male, age 76, both hemispheres 35.6
2619 Male, age 74, both hemispheres 29.5
2729 Female, age 91, right hemisphere 21.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 33.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 33.7
Samples: 197

Max nTPM: 60.1
Min nTPM: 16.5
Std nTPM: 7.7
Median nTPM: 32.7
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 60.1
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 59.3
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 58.7
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 53.8
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 52.1
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 50.7
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 49.7
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 49.0
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 48.8
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 48.5
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 48.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 19.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 19.6
FF:10153-102I9 76 years, female 20.5
FF:10169-103B7 60 years, female 18.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 14.8
Pig sample Sample description nTPM
Subiculum
nTPM: 13.3
Samples: 4

Max nTPM: 18.0
Min nTPM: 9.8
Sample A Female 18.0
Sample B Female 13.0
Sample C Male 12.5
Sample D Male 9.8
Dorsal hippocampus
nTPM: 13.7
Samples: 4

Max nTPM: 18.4
Min nTPM: 10.9
Sample A Female 18.4
Sample B Female 14.3
Sample C Male 10.9
Sample D Male 11.2
Entorhinal cortex
nTPM: 13.6
Samples: 4

Max nTPM: 16.2
Min nTPM: 11.4
Sample A Female 16.2
Sample B Female 13.5
Sample C Male 13.4
Sample D Male 11.4
Ventral hippocampus
nTPM: 14.9
Samples: 4

Max nTPM: 17.3
Min nTPM: 11.8
Sample A Female 17.3
Sample B Female 11.8
Sample C Male 16.7
Sample D Male 13.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 20.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 20.1
Samples: 4

Max nTPM: 20.7
Min nTPM: 19.5
Sample A Male 20.0
Sample B Male 20.7
Sample C Female 19.5
Sample D Female 20.1
Hippocampal formation
nTPM: 18.5
Samples: 4

Max nTPM: 19.9
Min nTPM: 17.1
Sample A Male 18.5
Sample B Male 17.1
Sample C Female 19.9
Sample D Female 18.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.7
69353614 Antisense, RP_050412_02_D03, Mouse strain C57BL/6J (56 days, male) 3.7

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