We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
64.9
nTPM
Monaco:
100.6
nTPM
Schmiedel:
42.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
64.9
HPA sample
nTPM
gdT-cell nTPM: 65.0
Samples: 6
Max nTPM: 77.3
Min nTPM: 47.0
P10809_1007
47.0
P10809_1022
71.6
P10809_1041
77.3
P10809_1060
67.1
P10809_1077
56.6
P10809_1098
70.1
MAIT T-cell nTPM: 56.6
Samples: 6
Max nTPM: 67.5
Min nTPM: 46.8
P10809_1006
46.8
P10809_1024
61.4
P10809_1043
67.5
P10809_1062
58.9
P10809_1083
53.0
P10809_1097
51.9
Memory CD4 T-cell nTPM: 52.9
Samples: 6
Max nTPM: 70.6
Min nTPM: 33.3
P10809_1014
33.3
P10809_1026
70.6
P10809_1045
64.9
P10809_1064
56.2
P10809_1086
45.6
P10809_1113
46.5
Memory CD8 T-cell nTPM: 54.9
Samples: 5
Max nTPM: 61.4
Min nTPM: 46.1
P10809_1012
50.9
P10809_1027
59.0
P10809_1046
61.4
P10809_1065
57.3
P10809_1111
46.1
Naive CD4 T-cell nTPM: 40.7
Samples: 6
Max nTPM: 56.1
Min nTPM: 27.9
P10809_1015
27.9
P10809_1030
43.3
P10809_1049
56.1
P10809_1068
44.1
P10809_1085
31.8
P10809_1112
40.9
Naive CD8 T-cell nTPM: 47.2
Samples: 6
Max nTPM: 59.4
Min nTPM: 29.3
P10809_1016
29.3
P10809_1031
59.4
P10809_1050
46.9
P10809_1069
59.2
P10809_1087
50.4
P10809_1110
37.7
T-reg nTPM: 61.7
Samples: 6
Max nTPM: 96.9
Min nTPM: 34.6
P10809_1018
39.5
P10809_1037
52.7
P10809_1056
96.9
P10809_1075
34.6
P10809_1094
91.2
P10809_1106
55.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
100.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 63.3
Samples: 4
Max nTPM: 73.0
Min nTPM: 43.4
RHH5202_R3573
66.1
RHH5230_R3602
70.7
RHH5259_R3631
43.4
RHH5288_R3660
73.0
Effector memory CD8 T-cell nTPM: 99.7
Samples: 4
Max nTPM: 111.4
Min nTPM: 91.5
RHH5203_R3574
98.1
RHH5231_R3603
111.4
RHH5260_R3632
91.5
RHH5289_R3661
97.8
MAIT T-cell nTPM: 82.4
Samples: 4
Max nTPM: 84.9
Min nTPM: 79.8
RHH5233_R3605
79.8
RHH5205_R3576
84.9
RHH5262_R3634
84.3
RHH5297_R3663
80.7
Memory CD4 T-cell TFH nTPM: 76.6
Samples: 4
Max nTPM: 92.8
Min nTPM: 66.9
RHH5300_R3666
71.8
RHH5236_R3608
66.9
RHH5265_R3637
92.8
RHH5208_R3579
74.9
Memory CD4 T-cell Th1 nTPM: 61.3
Samples: 4
Max nTPM: 70.8
Min nTPM: 36.4
RHH5210_R3581
68.9
RHH5302_R3668
68.9
RHH5238_R3610
36.4
RHH5267_R3639
70.8
Memory CD4 T-cell Th1/Th17 nTPM: 75.2
Samples: 4
Max nTPM: 96.4
Min nTPM: 46.3
RHH5303_R3669
96.4
RHH5211_R3582
85.7
RHH5239_R3611
46.3
RHH5268_R3640
72.2
Memory CD4 T-cell Th17 nTPM: 79.3
Samples: 4
Max nTPM: 100.2
Min nTPM: 65.0
RHH5304_R3670
77.8
RHH5212_R3583
100.2
RHH5240_R3612
74.1
RHH5269_R3641
65.0
Memory CD4 T-cell Th2 nTPM: 80.1
Samples: 4
Max nTPM: 102.3
Min nTPM: 57.2
RHH5305_R3671
83.1
RHH5213_R3584
102.3
RHH5241_R3613
57.2
RHH5270_R3642
77.9
Naive CD4 T-cell nTPM: 58.3
Samples: 4
Max nTPM: 67.5
Min nTPM: 50.4
RHH5306_R3672
50.4
RHH5214_R3585
64.4
RHH5242_R3614
51.0
RHH5271_R3643
67.5
Naive CD8 T-cell nTPM: 59.1
Samples: 4
Max nTPM: 77.6
Min nTPM: 25.8
RHH5201_R3572
77.6
RHH5229_R3601
25.8
RHH5258_R3630
61.1
RHH5287_R3659
72.0
Non-Vd2 gdTCR nTPM: 90.9
Samples: 4
Max nTPM: 109.5
Min nTPM: 73.1
RHH5235_R3607
109.5
RHH5264_R3636
99.8
RHH5207_R3578
81.2
RHH5299_R3665
73.1
T-reg nTPM: 68.5
Samples: 4
Max nTPM: 81.1
Min nTPM: 53.3
RHH5301_R3667
53.3
RHH5237_R3609
81.1
RHH5266_R3638
65.7
RHH5209_R3580
73.8
Terminal effector memory CD4 T-cell nTPM: 100.6
Samples: 2
Max nTPM: 114.7
Min nTPM: 86.4
RHH5243_R3615
114.7
RHH5272_R3644
86.4
Terminal effector memory CD8 T-cell nTPM: 96.6
Samples: 4
Max nTPM: 105.5
Min nTPM: 86.7
RHH5232_R3604
105.5
RHH5204_R3575
98.2
RHH5261_R3633
95.8
RHH5296_R3662
86.7
Vd2 gdTCR nTPM: 76.9
Samples: 4
Max nTPM: 81.1
Min nTPM: 69.6
RHH5234_R3606
81.1
RHH5206_R3577
77.8
RHH5263_R3635
79.2
RHH5298_R3664
69.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
