We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
89.6
nTPM
Monaco:
152.0
nTPM
Schmiedel:
109.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
89.6
HPA sample
nTPM
gdT-cell nTPM: 39.6
Samples: 6
Max nTPM: 56.3
Min nTPM: 23.6
P10809_1007
23.6
P10809_1022
39.1
P10809_1041
56.3
P10809_1060
40.6
P10809_1077
41.0
P10809_1098
36.8
MAIT T-cell nTPM: 35.0
Samples: 6
Max nTPM: 45.7
Min nTPM: 19.3
P10809_1006
19.3
P10809_1024
39.6
P10809_1043
43.9
P10809_1062
45.7
P10809_1083
33.2
P10809_1097
28.1
Memory CD4 T-cell nTPM: 58.6
Samples: 6
Max nTPM: 87.7
Min nTPM: 36.2
P10809_1014
36.2
P10809_1026
64.3
P10809_1045
87.7
P10809_1064
57.4
P10809_1086
50.7
P10809_1113
55.3
Memory CD8 T-cell nTPM: 43.3
Samples: 5
Max nTPM: 50.9
Min nTPM: 30.0
P10809_1012
30.0
P10809_1027
46.2
P10809_1046
44.3
P10809_1065
50.9
P10809_1111
45.0
Naive CD4 T-cell nTPM: 89.6
Samples: 6
Max nTPM: 143.0
Min nTPM: 55.1
P10809_1015
55.1
P10809_1030
96.6
P10809_1049
143.0
P10809_1068
88.9
P10809_1085
71.4
P10809_1112
82.6
Naive CD8 T-cell nTPM: 65.7
Samples: 6
Max nTPM: 106.8
Min nTPM: 43.5
P10809_1016
43.5
P10809_1031
106.8
P10809_1050
63.3
P10809_1069
71.6
P10809_1087
44.3
P10809_1110
64.8
T-reg nTPM: 86.3
Samples: 6
Max nTPM: 111.3
Min nTPM: 49.5
P10809_1018
49.5
P10809_1037
105.0
P10809_1056
111.3
P10809_1075
99.6
P10809_1094
74.9
P10809_1106
77.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
152.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 89.9
Samples: 4
Max nTPM: 107.9
Min nTPM: 67.7
RHH5202_R3573
107.9
RHH5230_R3602
67.7
RHH5259_R3631
84.9
RHH5288_R3660
98.9
Effector memory CD8 T-cell nTPM: 95.2
Samples: 4
Max nTPM: 114.2
Min nTPM: 67.4
RHH5203_R3574
111.4
RHH5231_R3603
114.2
RHH5260_R3632
67.4
RHH5289_R3661
87.9
MAIT T-cell nTPM: 57.3
Samples: 4
Max nTPM: 61.7
Min nTPM: 53.8
RHH5233_R3605
61.7
RHH5205_R3576
57.7
RHH5262_R3634
55.9
RHH5297_R3663
53.8
Memory CD4 T-cell TFH nTPM: 123.4
Samples: 4
Max nTPM: 143.8
Min nTPM: 98.8
RHH5300_R3666
98.8
RHH5236_R3608
143.8
RHH5265_R3637
112.3
RHH5208_R3579
138.8
Memory CD4 T-cell Th1 nTPM: 114.3
Samples: 4
Max nTPM: 139.4
Min nTPM: 91.2
RHH5210_R3581
139.4
RHH5302_R3668
132.0
RHH5238_R3610
91.2
RHH5267_R3639
94.6
Memory CD4 T-cell Th1/Th17 nTPM: 90.6
Samples: 4
Max nTPM: 100.3
Min nTPM: 79.6
RHH5303_R3669
100.1
RHH5211_R3582
82.4
RHH5239_R3611
100.3
RHH5268_R3640
79.6
Memory CD4 T-cell Th17 nTPM: 85.5
Samples: 4
Max nTPM: 113.2
Min nTPM: 71.1
RHH5304_R3670
71.1
RHH5212_R3583
113.2
RHH5240_R3612
79.2
RHH5269_R3641
78.6
Memory CD4 T-cell Th2 nTPM: 112.1
Samples: 4
Max nTPM: 147.4
Min nTPM: 93.6
RHH5305_R3671
102.3
RHH5213_R3584
93.6
RHH5241_R3613
147.4
RHH5270_R3642
105.0
Naive CD4 T-cell nTPM: 152.0
Samples: 4
Max nTPM: 165.4
Min nTPM: 141.7
RHH5306_R3672
147.0
RHH5214_R3585
141.7
RHH5242_R3614
165.4
RHH5271_R3643
154.0
Naive CD8 T-cell nTPM: 145.0
Samples: 4
Max nTPM: 166.3
Min nTPM: 105.0
RHH5201_R3572
163.2
RHH5229_R3601
105.0
RHH5258_R3630
166.3
RHH5287_R3659
145.3
Non-Vd2 gdTCR nTPM: 103.3
Samples: 4
Max nTPM: 130.8
Min nTPM: 84.5
RHH5235_R3607
86.9
RHH5264_R3636
111.0
RHH5207_R3578
130.8
RHH5299_R3665
84.5
T-reg nTPM: 99.3
Samples: 4
Max nTPM: 144.6
Min nTPM: 80.4
RHH5301_R3667
80.4
RHH5237_R3609
144.6
RHH5266_R3638
81.4
RHH5209_R3580
90.7
Terminal effector memory CD4 T-cell nTPM: 122.4
Samples: 2
Max nTPM: 155.2
Min nTPM: 89.6
RHH5243_R3615
89.6
RHH5272_R3644
155.2
Terminal effector memory CD8 T-cell nTPM: 104.5
Samples: 4
Max nTPM: 146.1
Min nTPM: 85.9
RHH5232_R3604
146.1
RHH5204_R3575
96.9
RHH5261_R3633
85.9
RHH5296_R3662
88.9
Vd2 gdTCR nTPM: 82.1
Samples: 4
Max nTPM: 105.2
Min nTPM: 58.2
RHH5234_R3606
75.9
RHH5206_R3577
105.2
RHH5263_R3635
88.9
RHH5298_R3664
58.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
