We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
108.6
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 108.6
Samples: 152
Max nTPM: 202.4
Min nTPM: 50.1
Std nTPM: 28.2
Median nTPM: 104.9
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
202.4
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
194.6
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
189.2
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
186.4
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
179.6
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
174.2
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
173.2
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
168.8
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
159.6
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
159.2
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
157.8
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
157.3
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
145.7
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
143.7
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
143.4
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
141.6
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
139.9
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
138.8
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
137.5
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
136.4
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
135.7
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
135.7
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
135.0
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
134.8
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
133.3
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
131.8
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
131.2
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
131.2
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
129.2
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
127.9
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
127.3
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
125.5
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
125.4
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
125.2
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
125.2
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
124.0
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
121.3
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
120.7
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
120.7
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
119.6
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
119.2
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
118.9
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
118.8
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
118.6
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
118.6
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
118.3
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
118.2
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
117.4
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
116.5
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
116.1
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
116.0
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
115.1
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
115.1
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
114.7
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
114.6
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
114.3
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
114.1
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
113.7
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
113.5
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
113.0
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
112.8
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
112.4
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
112.3
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
109.9
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
109.8
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
109.2
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
108.5
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
108.3
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
108.2
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
107.6
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
107.5
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
107.3
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
106.3
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
106.0
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
105.2
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
105.0
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
104.7
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
104.6
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
104.5
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
104.4
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
104.1
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
104.0
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
103.7
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
103.0
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
102.9
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
102.6
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
102.2
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
102.2
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
101.9
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
101.0
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
99.0
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
99.0
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
98.9
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
98.7
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
98.6
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
98.6
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
98.6
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
98.0
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
97.5
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
97.4
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
96.1
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
95.5
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
95.5
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
95.5
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
95.0
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
94.7
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
94.5
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
93.7
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
93.0
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
92.4
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
91.6
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
90.5
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
90.2
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
89.5
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
89.5
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
89.4
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
88.6
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
88.6
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
88.0
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
87.8
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
87.3
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
87.0
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
86.7
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
86.5
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
85.2
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
84.8
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
84.2
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
83.8
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
82.5
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
81.3
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
80.9
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
80.6
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
80.5
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
80.3
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
80.0
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
77.6
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
76.8
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
75.3
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
74.2
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
73.5
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
73.0
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
71.1
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
67.9
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
67.8
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
63.4
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
63.2
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
62.0
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
61.3
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
60.1
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
59.4
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
53.2
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
50.1
Show allShow less
AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
64.9
Mouse sample
Sample description
nTPM
Amygdala nTPM: 64.9
Samples: 4
Max nTPM: 69.7
Min nTPM: 61.5
Sample A
Male
62.5
Sample B
Male
69.7
Sample C
Female
65.9
Sample D
Female
61.5
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
