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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
392.8
nTPM
Monaco:
127.7
nTPM
Schmiedel:
76.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
392.8
HPA sample
nTPM
gdT-cell nTPM: 254.2
Samples: 6
Max nTPM: 368.7
Min nTPM: 146.4
P10809_1007
146.4
P10809_1022
302.6
P10809_1041
368.7
P10809_1060
210.9
P10809_1077
234.8
P10809_1098
261.8
MAIT T-cell nTPM: 237.7
Samples: 6
Max nTPM: 291.4
Min nTPM: 136.5
P10809_1006
136.5
P10809_1024
278.5
P10809_1043
291.4
P10809_1062
230.5
P10809_1083
217.8
P10809_1097
271.4
Memory CD4 T-cell nTPM: 244.2
Samples: 6
Max nTPM: 338.8
Min nTPM: 131.5
P10809_1014
131.5
P10809_1026
338.8
P10809_1045
297.3
P10809_1064
221.0
P10809_1086
229.0
P10809_1113
247.5
Memory CD8 T-cell nTPM: 249.1
Samples: 5
Max nTPM: 287.8
Min nTPM: 153.7
P10809_1012
153.7
P10809_1027
287.8
P10809_1046
285.8
P10809_1065
231.6
P10809_1111
286.7
Naive CD4 T-cell nTPM: 217.2
Samples: 6
Max nTPM: 364.9
Min nTPM: 105.9
P10809_1015
105.9
P10809_1030
233.1
P10809_1049
364.9
P10809_1068
167.1
P10809_1085
219.7
P10809_1112
212.7
Naive CD8 T-cell nTPM: 243.2
Samples: 6
Max nTPM: 318.2
Min nTPM: 130.1
P10809_1016
130.1
P10809_1031
318.2
P10809_1050
285.3
P10809_1069
254.1
P10809_1087
237.1
P10809_1110
234.2
T-reg nTPM: 392.8
Samples: 6
Max nTPM: 628.2
Min nTPM: 217.1
P10809_1018
217.1
P10809_1037
347.5
P10809_1056
628.2
P10809_1075
318.6
P10809_1094
426.9
P10809_1106
418.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
127.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 95.5
Samples: 4
Max nTPM: 136.3
Min nTPM: 60.9
RHH5202_R3573
117.6
RHH5230_R3602
67.2
RHH5259_R3631
60.9
RHH5288_R3660
136.3
Effector memory CD8 T-cell nTPM: 108.7
Samples: 4
Max nTPM: 126.9
Min nTPM: 69.9
RHH5203_R3574
126.9
RHH5231_R3603
119.4
RHH5260_R3632
69.9
RHH5289_R3661
118.4
MAIT T-cell nTPM: 101.4
Samples: 4
Max nTPM: 145.5
Min nTPM: 58.4
RHH5233_R3605
113.6
RHH5205_R3576
58.4
RHH5262_R3634
88.0
RHH5297_R3663
145.5
Memory CD4 T-cell TFH nTPM: 127.7
Samples: 4
Max nTPM: 154.8
Min nTPM: 106.5
RHH5300_R3666
118.1
RHH5236_R3608
154.8
RHH5265_R3637
106.5
RHH5208_R3579
131.2
Memory CD4 T-cell Th1 nTPM: 96.6
Samples: 4
Max nTPM: 124.5
Min nTPM: 69.1
RHH5210_R3581
106.2
RHH5302_R3668
124.5
RHH5238_R3610
69.1
RHH5267_R3639
86.7
Memory CD4 T-cell Th1/Th17 nTPM: 98.0
Samples: 4
Max nTPM: 145.2
Min nTPM: 42.5
RHH5303_R3669
145.2
RHH5211_R3582
125.3
RHH5239_R3611
42.5
RHH5268_R3640
78.9
Memory CD4 T-cell Th17 nTPM: 68.0
Samples: 4
Max nTPM: 99.6
Min nTPM: 43.7
RHH5304_R3670
73.2
RHH5212_R3583
99.6
RHH5240_R3612
43.7
RHH5269_R3641
55.5
Memory CD4 T-cell Th2 nTPM: 100.1
Samples: 4
Max nTPM: 109.5
Min nTPM: 82.5
RHH5305_R3671
109.5
RHH5213_R3584
103.9
RHH5241_R3613
104.3
RHH5270_R3642
82.5
Naive CD4 T-cell nTPM: 86.1
Samples: 4
Max nTPM: 126.0
Min nTPM: 65.2
RHH5306_R3672
84.0
RHH5214_R3585
126.0
RHH5242_R3614
65.2
RHH5271_R3643
69.3
Naive CD8 T-cell nTPM: 93.2
Samples: 4
Max nTPM: 135.7
Min nTPM: 34.7
RHH5201_R3572
115.0
RHH5229_R3601
34.7
RHH5258_R3630
135.7
RHH5287_R3659
87.2
Non-Vd2 gdTCR nTPM: 117.8
Samples: 4
Max nTPM: 151.5
Min nTPM: 61.4
RHH5235_R3607
61.4
RHH5264_R3636
143.7
RHH5207_R3578
114.5
RHH5299_R3665
151.5
T-reg nTPM: 105.4
Samples: 4
Max nTPM: 135.2
Min nTPM: 66.6
RHH5301_R3667
131.5
RHH5237_R3609
135.2
RHH5266_R3638
66.6
RHH5209_R3580
88.3
Terminal effector memory CD4 T-cell nTPM: 83.0
Samples: 2
Max nTPM: 107.9
Min nTPM: 58.1
RHH5243_R3615
58.1
RHH5272_R3644
107.9
Terminal effector memory CD8 T-cell nTPM: 120.2
Samples: 4
Max nTPM: 143.3
Min nTPM: 73.8
RHH5232_R3604
128.6
RHH5204_R3575
135.0
RHH5261_R3633
73.8
RHH5296_R3662
143.3
Vd2 gdTCR nTPM: 116.6
Samples: 4
Max nTPM: 146.6
Min nTPM: 82.1
RHH5234_R3606
100.0
RHH5206_R3577
137.8
RHH5263_R3635
82.1
RHH5298_R3664
146.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
