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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
1149.7
nTPM
FANTOM5:
1838.1
Scaled Tags Per Million
Pig:
1722.1
nTPM
Allen mouse:
1.7
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
1149.7
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 1068.7
2188
Female, age 91, both hemispheres
1368.8
2301
Female, age 85, both hemispheres
1319.8
2090
Male, age 80, both hemispheres
825.0
1984
Male, age 76, both hemispheres
761.1
Dorsal cochlear nucleus nTPM: 685.3
2187
Female, age 91, both hemispheres
1086.2
2802
Male, age 74, right hemisphere
669.5
2378
Male, age 80, both hemispheres
578.6
2058
Male, age 76, both hemispheres
577.5
2370
Male, age 61, both hemispheres
514.6
Dorsal tegmental nucleus nTPM: 687.2
2083
Male, age 80, both hemispheres
926.7
2326
Male, age 74, both hemispheres
752.4
2358
Male, age 61, both hemispheres
544.1
1936
Male, age 76, left hemisphere
525.6
Dorsolateral tegmental area nTPM: 648.4
2751
Female, age 85, both hemispheres
920.6
2654
Male, age 80, both hemispheres
739.2
2337
Male, age 61, both hemispheres
606.5
2141
Male, age 76, both hemispheres
506.8
2360
Male, age 74, both hemispheres
468.9
Kolliker-Fuse nucleus nTPM: 1033.6
2793
Female, age 91, left hemisphere
1748.3
2163
Male, age 80, both hemispheres
870.4
2315
Male, age 76, right hemisphere
482.1
Lateral lemniscal nuclei nTPM: 1087.9
2320
Female, age 91, left hemisphere
1529.0
2169
Male, age 76, both hemispheres
1190.8
2453
Male, age 74, right hemisphere
960.0
2036
Male, age 80, both hemispheres
930.4
2746
Female, age 85, left hemisphere
829.1
Lateral parabrachial nucleus nTPM: 859.6
2792
Male, age 76, both hemispheres
1129.9
2013
Male, age 80, both hemispheres
832.0
2139
Female, age 85, right hemisphere
822.2
2790
Male, age 61, both hemispheres
654.5
Lateral vestibular nucleus nTPM: 886.4
2184
Male, age 76, both hemispheres
896.2
2311
Male, age 80, both hemispheres
876.5
Locus coeruleus nTPM: 646.4
2720
Male, age 74, both hemispheres
806.8
2014
Male, age 55, unknown
703.5
2162
Male, age 80, both hemispheres
703.2
2123
Female, age 91, both hemispheres
684.1
2317
Female, age 72, unknown
626.2
2788
Male, age 74, unknown
514.6
1980
Male, age 76, both hemispheres
486.5
Medial parabrachial nucleus nTPM: 905.9
2170
Female, age 91, both hemispheres
1177.6
2854
Male, age 80, both hemispheres
1001.6
2463
Female, age 85, right hemisphere
880.7
2156
Male, age 61, both hemispheres
753.6
2786
Male, age 76, both hemispheres
716.0
Medial periolivary nuclei nTPM: 995.4
2458
Female, age 91, both hemispheres
1154.7
2171
Female, age 85, both hemispheres
979.0
2063
Male, age 76, both hemispheres
961.4
2791
Male, age 74, right hemisphere
948.0
2081
Male, age 80, both hemispheres
933.7
Motor facial nucleus nTPM: 1022.0
2697
Female, age 85, both hemispheres
1288.4
2365
Male, age 74, right hemisphere
1242.1
2327
Male, age 80, both hemispheres
1116.5
2062
Male, age 76, both hemispheres
940.8
2126
Male, age 61, both hemispheres
804.5
2795
Female, age 91, both hemispheres
739.8
Motor trigeminal nucleus nTPM: 943.4
2321
Female, age 91, both hemispheres
1215.9
2079
Male, age 80, both hemispheres
1049.0
2560
Male, age 74, both hemispheres
941.6
2335
Male, age 61, both hemispheres
789.6
2309
Male, age 76, both hemispheres
720.6
Nuclei of the trapezoid body nTPM: 1014.4
2159
Male, age 61, both hemispheres
1329.3
2166
Male, age 80, both hemispheres
1023.2
1983
Male, age 76, both hemispheres
966.5
2368
Female, age 91, both hemispheres
931.6
2735
Female, age 85, both hemispheres
821.3
Nucleus raphe magnus nTPM: 1116.8
2160
Male, age 61, both hemispheres
1241.0
2459
Female, age 91, both hemispheres
1225.7
2328
Male, age 80, both hemispheres
1140.1
2455
Male, age 74, both hemispheres
1115.7
2172
Female, age 85, both hemispheres
1018.5
2051
Male, age 76, both hemispheres
959.6
Paramedian reticular nucleus nTPM: 762.9
2050
Female, age 85, both hemispheres
859.1
2313
Male, age 61, both hemispheres
818.6
2057
Male, age 80, both hemispheres
798.2
2052
Male, age 76, both hemispheres
575.8
Pedunculopontine tegmental nucleus nTPM: 736.3
2334
Male, age 80, both hemispheres
799.8
2338
Male, age 61, both hemispheres
746.2
1921
Female, age 85, both hemispheres
662.9
Pontine nuclei nTPM: 1149.7
2454
Male, age 74, left hemisphere
1510.3
2319
Female, age 91, both hemispheres
1468.8
2787
Female, age 85, both hemispheres
1115.5
1863
Male, age 55, unknown
1099.3
2109
Female, age 72, unknown
1085.3
1968
Male, age 76, left hemisphere
1066.9
2115
Male, age 80, left hemisphere
997.2
2727
Male, age 61, right hemisphere
854.5
Pontine raphe nucleus nTPM: 700.0
2122
Female, age 85, midline
813.4
2853
Male, age 76, midline
586.6
Posteroventral cochlear nucleus nTPM: 864.3
2135
Female, age 91, both hemispheres
1384.3
2341
Male, age 80, both hemispheres
832.2
2070
Male, age 76, both hemispheres
822.6
2752
Female, age 85, both hemispheres
681.9
2371
Male, age 61, both hemispheres
600.3
Principal sensory trigeminal nucleus nTPM: 1112.5
2367
Female, age 91, left hemisphere
1557.9
2158
Male, age 61, both hemispheres
1215.1
2324
Male, age 76, both hemispheres
863.0
2008
Male, age 80, left hemisphere
814.1
Reticular pontine nucleus, caudal nTPM: 1124.9
2457
Female, age 91, both hemispheres
1266.9
2332
Male, age 80, right hemisphere
1156.7
2559
Male, age 74, both hemispheres
1054.1
2092
Male, age 76, both hemispheres
1022.0
Reticular pontine nucleus, oral nTPM: 1039.2
2366
Female, age 91, both hemispheres
1548.0
2361
Male, age 74, both hemispheres
1173.2
2012
Female, age 85, both hemispheres
857.4
2167
Male, age 76, both hemispheres
849.4
1939
Male, age 80, both hemispheres
768.2
Reticulotegmental nucleus nTPM: 897.9
2322
Female, age 91, both hemispheres
1017.4
2333
Male, age 80, both hemispheres
927.5
2452
Male, age 74, both hemispheres
850.2
2325
Male, age 76, both hemispheres
796.3
Spinal trigeminal nucleus, oral nTPM: 792.3
2164
Male, age 80, both hemispheres
917.4
1978
Male, age 76, both hemispheres
763.9
2737
Female, age 85, both hemispheres
695.7
Subcoeruleus area nTPM: 813.9
2369
Female, age 85, left hemisphere
1000.1
2089
Male, age 76, left hemisphere
963.7
1958
Male, age 80, both hemispheres
789.2
2323
Female, age 91, left hemisphere
752.2
2451
Male, age 74, both hemispheres
564.5
Superior olive nTPM: 1066.0
2329
Male, age 80, right hemisphere
1230.4
2364
Male, age 74, right hemisphere
1162.6
2561
Female, age 91, both hemispheres
1109.1
2020
Male, age 76, both hemispheres
991.9
1875
Female, age 85, both hemispheres
835.9
Ventral periolivary nuclei nTPM: 958.7
2165
Male, age 80, both hemispheres
1068.6
2023
Male, age 76, both hemispheres
940.2
2130
Female, age 85, both hemispheres
935.0
2794
Female, age 91, left hemisphere
891.0
Ventrolateral tegmental area, A5 NE cell group nTPM: 975.9
2449
Male, age 74, both hemispheres
1098.8
2456
Female, age 91, both hemispheres
1040.4
2840
Female, age 85, both hemispheres
969.6
2161
Male, age 80, both hemispheres
953.5
1959
Male, age 76, both hemispheres
940.7
2359
Male, age 61, both hemispheres
852.3
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
1722.1
Pig sample
Sample description
nTPM
Pons nTPM: 1722.1
Samples: 4
Max nTPM: 2544.1
Min nTPM: 1128.5
Sample A
Female
1753.7
Sample B
Female
1128.5
Sample C
Male
1462.0
Sample D
Male
2544.1
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
