HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:494.5 nTPM
HPA Brain:741.3 nTPM
GTEx:494.5 nTPM
FANTOM5:551.9 Scaled Tags Per Million
Pig:1358.4 nTPM
Mouse:623.5 nTPM
Allen mouse:0.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA043640Antibody HPA046280Antibody CAB010768
Glial cells Not detectedNot detectedMedium
Neuronal cells LowMediumLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 741.3
Sample id Sample description nTPM
Hippocampus
nTPM: 617.6
2621 Female, age 67, right hemisphere 759.7
1898 Male, age 80, left hemisphere 697.7
1911 Female, age 85, right hemisphere 606.3
2529 Female, age 94, left hemisphere 589.1
1855 Male, age 76, left hemisphere 574.0
2148 Female, age 91, left hemisphere 478.7
Dentate gyrus
nTPM: 644.2
2530 Female, age 94, left hemisphere 914.9
2246 Female, age 85, both hemispheres 688.7
2010 Male, age 76, both hemispheres 677.7
2528 Male, age 74, both hemispheres 573.9
1927 Female, age 91, both hemispheres 519.9
2531 Female, age 67, both hemispheres 490.4
Entorhinal gyrus
nTPM: 741.3
2613 Female, age 94, left hemisphere 927.8
2764 Male, age 80, right hemisphere 914.4
2117 Female, age 91, right hemisphere 745.0
1938 Female, age 85, left hemisphere 712.4
1787 Male, age 76, left hemisphere 667.9
2686 Male, age 75, right hemisphere 480.4
Hippocampus, CA1
nTPM: 625.5
2749 Male, age 80, left hemisphere 1016.6
2527 Male, age 74, both hemispheres 622.6
1873 Female, age 85, both hemispheres 572.2
2082 Female, age 91, right hemisphere 491.1
2045 Male, age 76, both hemispheres 425.2
Hippocampus, CA2
nTPM: 639.4
1892 Male, age 76, both hemispheres 674.5
2249 Male, age 74, both hemispheres 666.8
1963 Male, age 80, left hemisphere 661.1
2437 Female, age 94, left hemisphere 656.8
1940 Female, age 85, left hemisphere 640.3
2113 Female, age 91, right hemisphere 536.8
Hippocampus, CA3
nTPM: 576.5
2137 Male, age 80, left hemisphere 876.2
1867 Male, age 76, both hemispheres 611.2
1891 Female, age 85, both hemispheres 599.6
2620 Female, age 94, left hemisphere 512.8
2436 Male, age 74, both hemispheres 485.0
2861 Female, age 67, both hemispheres 374.1
Parahippocampal cortex
nTPM: 691.1
2532 Female, age 72, left hemisphere 992.8
2245 Female, age 91, both hemispheres 893.9
1850 Male, age 80, both hemispheres 701.2
2250 Female, age 67, right hemisphere 672.9
1990 Female, age 91, right hemisphere 670.5
1933 Female, age 85, both hemispheres 653.0
2692 Male, age 74, both hemispheres 640.7
2018 Male, age 76, both hemispheres 621.8
2693 Female, age 94, both hemispheres 618.4
2622 Female, age 67, right hemisphere 445.8
Perirhinal gyrus
nTPM: 701.0
2521 Female, age 94, right hemisphere 912.2
1794 Male, age 80, right hemisphere 752.4
1847 Female, age 91, left hemisphere 635.7
1841 Female, age 85, right hemisphere 603.0
2848 Male, age 76, right hemisphere 601.6
Subiculum
nTPM: 737.5
2042 Male, age 76, both hemispheres 937.4
1901 Male, age 80, both hemispheres 899.9
1977 Female, age 85, both hemispheres 815.3
2438 Female, age 94, left hemisphere 763.5
2619 Male, age 74, both hemispheres 626.7
2729 Female, age 91, right hemisphere 382.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 494.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 494.5
Samples: 197

Max nTPM: 1110.7
Min nTPM: 52.1
Std nTPM: 217.9
Median nTPM: 451.3
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 1110.7
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 1075.0
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 1032.9
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 1027.9
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 1004.1
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 995.9
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 992.0
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 985.6
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 948.5
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 922.6
GTEX-1HBPI-0011-R1b-SM-A9SKF 50-59 years, male 868.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 551.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 551.9
FF:10169-103B7 60 years, female 635.6
FF:10153-102I9 76 years, female 468.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 1358.4
Pig sample Sample description nTPM
Subiculum
nTPM: 765.8
Samples: 4

Max nTPM: 916.2
Min nTPM: 676.6
Sample A Female 916.2
Sample B Female 766.1
Sample C Male 676.6
Sample D Male 704.2
Dorsal hippocampus
nTPM: 1358.4
Samples: 4

Max nTPM: 2019.0
Min nTPM: 586.5
Sample A Female 1890.8
Sample B Female 937.3
Sample C Male 2019.0
Sample D Male 586.5
Entorhinal cortex
nTPM: 660.6
Samples: 4

Max nTPM: 784.1
Min nTPM: 593.1
Sample A Female 629.9
Sample B Female 635.3
Sample C Male 593.1
Sample D Male 784.1
Ventral hippocampus
nTPM: 947.1
Samples: 4

Max nTPM: 1301.9
Min nTPM: 482.5
Sample A Female 962.8
Sample B Female 482.5
Sample C Male 1041.1
Sample D Male 1301.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 623.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 517.5
Samples: 4

Max nTPM: 581.4
Min nTPM: 438.0
Sample A Male 556.8
Sample B Male 493.8
Sample C Female 438.0
Sample D Female 581.4
Hippocampal formation
nTPM: 623.5
Samples: 4

Max nTPM: 754.9
Min nTPM: 506.8
Sample A Male 506.8
Sample B Male 627.3
Sample C Female 754.9
Sample D Female 605.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.7
1081 Antisense, RP_Baylor_103091, Mouse strain C57BL/6J (56 days, male) 1.4
1082 Antisense, RP_Baylor_103091, Mouse strain C57BL/6J (56 days, male) 1.1
1083 Sense, RPS_Baylor_37062, Mouse strain C57BL/6J (56 days, male) 0.0

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