HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:83.2 nTPM
HPA Brain:31.1 nTPM
GTEx:83.2 nTPM
FANTOM5:337.2 Scaled Tags Per Million
Pig:109.8 nTPM
Mouse:41.9 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042050Antibody HPA043516Antibody CAB001718
Glial cells HighLowLow
Neuronal cells HighHighHigh






HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 31.1
Sample id Sample description nTPM
Hippocampus
nTPM: 31.1
2529 Female, age 94, left hemisphere 44.6
2148 Female, age 91, left hemisphere 33.4
2621 Female, age 67, right hemisphere 32.4
1898 Male, age 80, left hemisphere 25.8
1855 Male, age 76, left hemisphere 25.7
1911 Female, age 85, right hemisphere 24.9
Dentate gyrus
nTPM: 29.7
2530 Female, age 94, left hemisphere 42.3
2531 Female, age 67, both hemispheres 39.3
2246 Female, age 85, both hemispheres 33.4
2010 Male, age 76, both hemispheres 25.1
1927 Female, age 91, both hemispheres 21.9
2528 Male, age 74, both hemispheres 16.2
Entorhinal gyrus
nTPM: 27.3
2686 Male, age 75, right hemisphere 39.7
2117 Female, age 91, right hemisphere 26.2
2764 Male, age 80, right hemisphere 26.1
2613 Female, age 94, left hemisphere 24.5
1787 Male, age 76, left hemisphere 24.1
1938 Female, age 85, left hemisphere 23.1
Hippocampus, CA1
nTPM: 28.0
2527 Male, age 74, both hemispheres 32.5
2749 Male, age 80, left hemisphere 28.9
1873 Female, age 85, both hemispheres 27.4
2082 Female, age 91, right hemisphere 25.6
2045 Male, age 76, both hemispheres 25.3
Hippocampus, CA2
nTPM: 24.6
1940 Female, age 85, left hemisphere 34.5
2437 Female, age 94, left hemisphere 26.7
2113 Female, age 91, right hemisphere 26.0
1892 Male, age 76, both hemispheres 24.9
1963 Male, age 80, left hemisphere 19.0
2249 Male, age 74, both hemispheres 16.3
Hippocampus, CA3
nTPM: 30.6
2861 Female, age 67, both hemispheres 43.7
2620 Female, age 94, left hemisphere 34.5
1891 Female, age 85, both hemispheres 30.2
2137 Male, age 80, left hemisphere 28.4
1867 Male, age 76, both hemispheres 23.7
2436 Male, age 74, both hemispheres 23.1
Parahippocampal cortex
nTPM: 28.1
2245 Female, age 91, both hemispheres 38.9
2622 Female, age 67, right hemisphere 37.8
2532 Female, age 72, left hemisphere 32.4
1990 Female, age 91, right hemisphere 28.3
2692 Male, age 74, both hemispheres 28.2
1850 Male, age 80, both hemispheres 25.9
1933 Female, age 85, both hemispheres 24.8
2250 Female, age 67, right hemisphere 21.9
2693 Female, age 94, both hemispheres 21.9
2018 Male, age 76, both hemispheres 21.3
Perirhinal gyrus
nTPM: 25.3
1847 Female, age 91, left hemisphere 26.4
2848 Male, age 76, right hemisphere 25.8
1841 Female, age 85, right hemisphere 25.6
2521 Female, age 94, right hemisphere 24.5
1794 Male, age 80, right hemisphere 24.2
Subiculum
nTPM: 24.9
1901 Male, age 80, both hemispheres 28.7
2042 Male, age 76, both hemispheres 26.7
2438 Female, age 94, left hemisphere 26.7
1977 Female, age 85, both hemispheres 25.7
2619 Male, age 74, both hemispheres 21.9
2729 Female, age 91, right hemisphere 19.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 83.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 83.2
Samples: 197

Max nTPM: 167.4
Min nTPM: 19.5
Std nTPM: 22.4
Median nTPM: 83.4
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 167.4
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 156.1
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 154.8
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 132.1
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 130.5
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 127.9
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 127.6
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 125.9
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 117.2
GTEX-13OW6-0011-R1a-SM-5L3HQ 50-59 years, male 114.0
GTEX-1I1GS-0011-R1a-SM-CJI43 60-69 years, male 113.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 337.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 337.2
FF:10153-102I9 76 years, female 377.4
FF:10169-103B7 60 years, female 297.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 109.8
Pig sample Sample description nTPM
Subiculum
nTPM: 101.3
Samples: 4

Max nTPM: 107.7
Min nTPM: 89.3
Sample A Female 89.3
Sample B Female 105.1
Sample C Male 103.2
Sample D Male 107.7
Dorsal hippocampus
nTPM: 104.0
Samples: 4

Max nTPM: 113.8
Min nTPM: 93.9
Sample A Female 93.9
Sample B Female 103.8
Sample C Male 113.8
Sample D Male 104.6
Entorhinal cortex
nTPM: 96.3
Samples: 4

Max nTPM: 109.3
Min nTPM: 83.0
Sample A Female 95.2
Sample B Female 97.7
Sample C Male 83.0
Sample D Male 109.3
Ventral hippocampus
nTPM: 109.8
Samples: 4

Max nTPM: 129.3
Min nTPM: 96.7
Sample A Female 96.8
Sample B Female 96.7
Sample C Male 116.5
Sample D Male 129.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 41.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 39.3
Samples: 4

Max nTPM: 41.5
Min nTPM: 38.4
Sample A Male 38.4
Sample B Male 38.7
Sample C Female 38.7
Sample D Female 41.5
Hippocampal formation
nTPM: 41.9
Samples: 4

Max nTPM: 48.7
Min nTPM: 35.8
Sample A Male 35.8
Sample B Male 48.7
Sample C Female 44.9
Sample D Female 38.3

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