HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:38.3 nTPM
HPA Brain:26.4 nTPM
GTEx:38.3 nTPM
FANTOM5:17.8 Scaled Tags Per Million
Pig:48.2 nTPM
Mouse:73.8 nTPM
Allen mouse:5.8 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 26.4
Sample id Sample description nTPM
Hippocampus
nTPM: 18.5
1898 Male, age 80, left hemisphere 23.0
2621 Female, age 67, right hemisphere 21.1
1911 Female, age 85, right hemisphere 20.0
2148 Female, age 91, left hemisphere 16.9
1855 Male, age 76, left hemisphere 15.1
2529 Female, age 94, left hemisphere 14.9
Dentate gyrus
nTPM: 18.1
1927 Female, age 91, both hemispheres 23.1
2246 Female, age 85, both hemispheres 20.6
2010 Male, age 76, both hemispheres 18.6
2530 Female, age 94, left hemisphere 16.3
2531 Female, age 67, both hemispheres 15.6
2528 Male, age 74, both hemispheres 14.2
Entorhinal gyrus
nTPM: 19.7
2764 Male, age 80, right hemisphere 26.4
2613 Female, age 94, left hemisphere 25.3
1938 Female, age 85, left hemisphere 19.6
1787 Male, age 76, left hemisphere 19.1
2686 Male, age 75, right hemisphere 15.6
2117 Female, age 91, right hemisphere 12.4
Hippocampus, CA1
nTPM: 22.3
2749 Male, age 80, left hemisphere 42.3
2527 Male, age 74, both hemispheres 20.6
1873 Female, age 85, both hemispheres 17.8
2045 Male, age 76, both hemispheres 16.0
2082 Female, age 91, right hemisphere 15.1
Hippocampus, CA2
nTPM: 20.7
2437 Female, age 94, left hemisphere 25.1
1963 Male, age 80, left hemisphere 23.8
1892 Male, age 76, both hemispheres 23.6
2249 Male, age 74, both hemispheres 18.1
2113 Female, age 91, right hemisphere 17.3
1940 Female, age 85, left hemisphere 16.7
Hippocampus, CA3
nTPM: 20.1
2137 Male, age 80, left hemisphere 32.4
1867 Male, age 76, both hemispheres 21.6
2620 Female, age 94, left hemisphere 19.9
2436 Male, age 74, both hemispheres 17.9
1891 Female, age 85, both hemispheres 17.6
2861 Female, age 67, both hemispheres 11.3
Parahippocampal cortex
nTPM: 20.4
2245 Female, age 91, both hemispheres 27.3
1990 Female, age 91, right hemisphere 25.1
1933 Female, age 85, both hemispheres 24.8
2250 Female, age 67, right hemisphere 23.7
1850 Male, age 80, both hemispheres 23.5
2532 Female, age 72, left hemisphere 20.1
2018 Male, age 76, both hemispheres 17.2
2692 Male, age 74, both hemispheres 16.2
2693 Female, age 94, both hemispheres 13.3
2622 Female, age 67, right hemisphere 12.6
Perirhinal gyrus
nTPM: 26.4
1847 Female, age 91, left hemisphere 35.3
1794 Male, age 80, right hemisphere 31.8
2521 Female, age 94, right hemisphere 25.0
1841 Female, age 85, right hemisphere 23.8
2848 Male, age 76, right hemisphere 16.1
Subiculum
nTPM: 18.7
1901 Male, age 80, both hemispheres 24.8
2438 Female, age 94, left hemisphere 21.4
1977 Female, age 85, both hemispheres 21.0
2619 Male, age 74, both hemispheres 20.5
2042 Male, age 76, both hemispheres 12.7
2729 Female, age 91, right hemisphere 11.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 38.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 38.3
Samples: 197

Max nTPM: 125.9
Min nTPM: 6.5
Std nTPM: 19.5
Median nTPM: 36.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 125.9
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 98.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 95.7
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 94.8
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 88.2
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 86.2
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 82.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 82.1
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 81.3
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 79.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 76.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 17.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 17.8
FF:10169-103B7 60 years, female 25.9
FF:10153-102I9 76 years, female 9.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 48.2
Pig sample Sample description nTPM
Subiculum
nTPM: 40.5
Samples: 4

Max nTPM: 59.0
Min nTPM: 28.8
Sample A Female 59.0
Sample B Female 38.5
Sample C Male 35.5
Sample D Male 28.8
Dorsal hippocampus
nTPM: 46.2
Samples: 4

Max nTPM: 64.5
Min nTPM: 29.2
Sample A Female 64.5
Sample B Female 45.0
Sample C Male 46.2
Sample D Male 29.2
Entorhinal cortex
nTPM: 48.2
Samples: 4

Max nTPM: 50.2
Min nTPM: 45.9
Sample A Female 47.6
Sample B Female 49.1
Sample C Male 50.2
Sample D Male 45.9
Ventral hippocampus
nTPM: 41.9
Samples: 4

Max nTPM: 54.9
Min nTPM: 31.1
Sample A Female 33.2
Sample B Female 31.1
Sample C Male 48.3
Sample D Male 54.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 73.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 73.8
Samples: 4

Max nTPM: 81.7
Min nTPM: 67.8
Sample A Male 74.3
Sample B Male 81.7
Sample C Female 67.8
Sample D Female 71.4
Hippocampal formation
nTPM: 70.8
Samples: 4

Max nTPM: 77.4
Min nTPM: 66.1
Sample A Male 77.4
Sample B Male 66.6
Sample C Female 66.1
Sample D Female 73.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.8
73617678 Antisense, RP_051130_02_D08, Mouse strain C57BL/6J (56 days, male) 5.8

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