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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
158.7
nTPM
Monaco:
85.2
nTPM
Schmiedel:
130.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
158.7
HPA sample
nTPM
gdT-cell nTPM: 88.5
Samples: 6
Max nTPM: 103.0
Min nTPM: 70.7
P10809_1007
70.7
P10809_1022
103.0
P10809_1041
96.5
P10809_1060
85.7
P10809_1077
82.9
P10809_1098
92.4
MAIT T-cell nTPM: 75.8
Samples: 6
Max nTPM: 100.0
Min nTPM: 53.0
P10809_1006
53.0
P10809_1024
63.0
P10809_1043
96.1
P10809_1062
80.7
P10809_1083
61.7
P10809_1097
100.0
Memory CD4 T-cell nTPM: 99.1
Samples: 6
Max nTPM: 126.5
Min nTPM: 79.5
P10809_1014
82.4
P10809_1026
126.5
P10809_1045
126.3
P10809_1064
79.5
P10809_1086
82.2
P10809_1113
97.5
Memory CD8 T-cell nTPM: 95.0
Samples: 5
Max nTPM: 118.2
Min nTPM: 68.4
P10809_1012
68.4
P10809_1027
102.4
P10809_1046
118.2
P10809_1065
87.9
P10809_1111
97.9
Naive CD4 T-cell nTPM: 79.8
Samples: 6
Max nTPM: 135.1
Min nTPM: 52.2
P10809_1015
52.2
P10809_1030
88.6
P10809_1049
135.1
P10809_1068
63.4
P10809_1085
63.0
P10809_1112
76.3
Naive CD8 T-cell nTPM: 73.6
Samples: 6
Max nTPM: 101.0
Min nTPM: 42.6
P10809_1016
67.3
P10809_1031
42.6
P10809_1050
101.0
P10809_1069
82.0
P10809_1087
75.7
P10809_1110
72.9
T-reg nTPM: 158.7
Samples: 6
Max nTPM: 176.8
Min nTPM: 124.9
P10809_1018
138.0
P10809_1037
166.1
P10809_1056
176.8
P10809_1075
124.9
P10809_1094
175.0
P10809_1106
171.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
85.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 62.1
Samples: 4
Max nTPM: 94.7
Min nTPM: 35.9
RHH5202_R3573
70.4
RHH5230_R3602
47.5
RHH5259_R3631
35.9
RHH5288_R3660
94.7
Effector memory CD8 T-cell nTPM: 62.0
Samples: 4
Max nTPM: 72.8
Min nTPM: 47.6
RHH5203_R3574
69.4
RHH5231_R3603
58.0
RHH5260_R3632
47.6
RHH5289_R3661
72.8
MAIT T-cell nTPM: 60.2
Samples: 4
Max nTPM: 71.9
Min nTPM: 41.1
RHH5233_R3605
69.1
RHH5205_R3576
41.1
RHH5262_R3634
58.5
RHH5297_R3663
71.9
Memory CD4 T-cell TFH nTPM: 73.9
Samples: 4
Max nTPM: 84.7
Min nTPM: 60.7
RHH5300_R3666
77.3
RHH5236_R3608
84.7
RHH5265_R3637
72.7
RHH5208_R3579
60.7
Memory CD4 T-cell Th1 nTPM: 67.9
Samples: 4
Max nTPM: 97.0
Min nTPM: 50.8
RHH5210_R3581
69.5
RHH5302_R3668
97.0
RHH5238_R3610
54.3
RHH5267_R3639
50.8
Memory CD4 T-cell Th1/Th17 nTPM: 63.8
Samples: 4
Max nTPM: 104.3
Min nTPM: 37.7
RHH5303_R3669
104.3
RHH5211_R3582
67.5
RHH5239_R3611
37.7
RHH5268_R3640
45.6
Memory CD4 T-cell Th17 nTPM: 56.1
Samples: 4
Max nTPM: 82.4
Min nTPM: 34.9
RHH5304_R3670
57.2
RHH5212_R3583
82.4
RHH5240_R3612
50.0
RHH5269_R3641
34.9
Memory CD4 T-cell Th2 nTPM: 77.7
Samples: 4
Max nTPM: 89.1
Min nTPM: 64.5
RHH5305_R3671
76.2
RHH5213_R3584
80.9
RHH5241_R3613
89.1
RHH5270_R3642
64.5
Naive CD4 T-cell nTPM: 67.1
Samples: 4
Max nTPM: 74.6
Min nTPM: 57.0
RHH5306_R3672
65.9
RHH5214_R3585
74.6
RHH5242_R3614
70.8
RHH5271_R3643
57.0
Naive CD8 T-cell nTPM: 56.1
Samples: 4
Max nTPM: 71.7
Min nTPM: 25.4
RHH5201_R3572
66.2
RHH5229_R3601
25.4
RHH5258_R3630
71.7
RHH5287_R3659
61.0
Non-Vd2 gdTCR nTPM: 64.5
Samples: 4
Max nTPM: 71.4
Min nTPM: 59.0
RHH5235_R3607
59.4
RHH5264_R3636
68.3
RHH5207_R3578
59.0
RHH5299_R3665
71.4
T-reg nTPM: 85.2
Samples: 4
Max nTPM: 127.5
Min nTPM: 55.3
RHH5301_R3667
82.5
RHH5237_R3609
127.5
RHH5266_R3638
55.3
RHH5209_R3580
75.4
Terminal effector memory CD4 T-cell nTPM: 61.2
Samples: 2
Max nTPM: 74.0
Min nTPM: 48.3
RHH5243_R3615
48.3
RHH5272_R3644
74.0
Terminal effector memory CD8 T-cell nTPM: 64.2
Samples: 4
Max nTPM: 72.2
Min nTPM: 57.6
RHH5232_R3604
68.8
RHH5204_R3575
58.2
RHH5261_R3633
57.6
RHH5296_R3662
72.2
Vd2 gdTCR nTPM: 63.0
Samples: 4
Max nTPM: 79.8
Min nTPM: 32.4
RHH5234_R3606
68.8
RHH5206_R3577
79.8
RHH5263_R3635
32.4
RHH5298_R3664
70.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
