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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
468.4
nTPM
Monaco:
330.2
nTPM
Schmiedel:
318.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
468.4
HPA sample
nTPM
gdT-cell nTPM: 353.9
Samples: 6
Max nTPM: 469.9
Min nTPM: 305.3
P10809_1007
325.7
P10809_1022
382.0
P10809_1041
469.9
P10809_1060
305.3
P10809_1077
322.6
P10809_1098
318.0
MAIT T-cell nTPM: 358.1
Samples: 6
Max nTPM: 448.0
Min nTPM: 307.5
P10809_1006
322.8
P10809_1024
328.7
P10809_1043
402.5
P10809_1062
339.0
P10809_1083
307.5
P10809_1097
448.0
Memory CD4 T-cell nTPM: 427.5
Samples: 6
Max nTPM: 515.1
Min nTPM: 375.4
P10809_1014
409.1
P10809_1026
515.1
P10809_1045
488.0
P10809_1064
398.0
P10809_1086
375.4
P10809_1113
379.6
Memory CD8 T-cell nTPM: 376.2
Samples: 5
Max nTPM: 461.1
Min nTPM: 319.5
P10809_1012
369.4
P10809_1027
319.5
P10809_1046
461.1
P10809_1065
379.8
P10809_1111
351.1
Naive CD4 T-cell nTPM: 436.7
Samples: 6
Max nTPM: 585.3
Min nTPM: 364.7
P10809_1015
383.5
P10809_1030
425.1
P10809_1049
585.3
P10809_1068
400.3
P10809_1085
461.2
P10809_1112
364.7
Naive CD8 T-cell nTPM: 369.7
Samples: 6
Max nTPM: 398.7
Min nTPM: 322.9
P10809_1016
398.7
P10809_1031
367.5
P10809_1050
397.6
P10809_1069
396.1
P10809_1087
322.9
P10809_1110
335.5
T-reg nTPM: 468.4
Samples: 6
Max nTPM: 666.9
Min nTPM: 372.0
P10809_1018
372.0
P10809_1037
373.2
P10809_1056
666.9
P10809_1075
467.5
P10809_1094
488.8
P10809_1106
441.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
330.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 261.8
Samples: 4
Max nTPM: 327.0
Min nTPM: 177.6
RHH5202_R3573
277.3
RHH5230_R3602
265.4
RHH5259_R3631
177.6
RHH5288_R3660
327.0
Effector memory CD8 T-cell nTPM: 248.4
Samples: 4
Max nTPM: 320.7
Min nTPM: 189.0
RHH5203_R3574
274.2
RHH5231_R3603
320.7
RHH5260_R3632
209.5
RHH5289_R3661
189.0
MAIT T-cell nTPM: 266.2
Samples: 4
Max nTPM: 317.7
Min nTPM: 183.5
RHH5233_R3605
314.9
RHH5205_R3576
183.5
RHH5262_R3634
248.7
RHH5297_R3663
317.7
Memory CD4 T-cell TFH nTPM: 330.2
Samples: 4
Max nTPM: 360.3
Min nTPM: 300.7
RHH5300_R3666
360.3
RHH5236_R3608
304.8
RHH5265_R3637
354.9
RHH5208_R3579
300.7
Memory CD4 T-cell Th1 nTPM: 279.9
Samples: 4
Max nTPM: 346.7
Min nTPM: 215.8
RHH5210_R3581
346.7
RHH5302_R3668
311.5
RHH5238_R3610
245.5
RHH5267_R3639
215.8
Memory CD4 T-cell Th1/Th17 nTPM: 273.8
Samples: 4
Max nTPM: 364.4
Min nTPM: 175.9
RHH5303_R3669
364.4
RHH5211_R3582
311.1
RHH5239_R3611
175.9
RHH5268_R3640
243.9
Memory CD4 T-cell Th17 nTPM: 262.4
Samples: 4
Max nTPM: 395.7
Min nTPM: 188.9
RHH5304_R3670
250.6
RHH5212_R3583
395.7
RHH5240_R3612
214.5
RHH5269_R3641
188.9
Memory CD4 T-cell Th2 nTPM: 324.5
Samples: 4
Max nTPM: 392.3
Min nTPM: 256.8
RHH5305_R3671
333.4
RHH5213_R3584
315.4
RHH5241_R3613
392.3
RHH5270_R3642
256.8
Naive CD4 T-cell nTPM: 291.0
Samples: 4
Max nTPM: 336.1
Min nTPM: 239.4
RHH5306_R3672
320.0
RHH5214_R3585
268.4
RHH5242_R3614
336.1
RHH5271_R3643
239.4
Naive CD8 T-cell nTPM: 228.0
Samples: 4
Max nTPM: 295.3
Min nTPM: 181.4
RHH5201_R3572
196.6
RHH5229_R3601
181.4
RHH5258_R3630
295.3
RHH5287_R3659
238.6
Non-Vd2 gdTCR nTPM: 291.0
Samples: 4
Max nTPM: 337.6
Min nTPM: 206.2
RHH5235_R3607
206.2
RHH5264_R3636
334.3
RHH5207_R3578
285.7
RHH5299_R3665
337.6
T-reg nTPM: 288.5
Samples: 4
Max nTPM: 393.8
Min nTPM: 247.7
RHH5301_R3667
393.8
RHH5237_R3609
247.7
RHH5266_R3638
253.8
RHH5209_R3580
258.7
Terminal effector memory CD4 T-cell nTPM: 295.7
Samples: 2
Max nTPM: 369.5
Min nTPM: 221.8
RHH5243_R3615
221.8
RHH5272_R3644
369.5
Terminal effector memory CD8 T-cell nTPM: 320.9
Samples: 4
Max nTPM: 371.9
Min nTPM: 241.7
RHH5232_R3604
371.9
RHH5204_R3575
337.8
RHH5261_R3633
241.7
RHH5296_R3662
332.3
Vd2 gdTCR nTPM: 307.4
Samples: 4
Max nTPM: 348.1
Min nTPM: 247.6
RHH5234_R3606
309.4
RHH5206_R3577
348.1
RHH5263_R3635
247.6
RHH5298_R3664
324.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.