HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni
Consensus:301.7 nTPM
HPA Brain:136.8 nTPM
GTEx:301.7 nTPM
FANTOM5:483.5 Scaled Tags Per Million
Pig:341.1 nTPM
Mouse:524.7 nTPM
Allen mouse:15.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA009291
Glial cells Not detected
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 136.8
Sample id Sample description nTPM
Hippocampus
nTPM: 118.6
1898 Male, age 80, left hemisphere 178.0
1855 Male, age 76, left hemisphere 126.1
1911 Female, age 85, right hemisphere 112.6
2529 Female, age 94, left hemisphere 106.2
2621 Female, age 67, right hemisphere 102.0
2148 Female, age 91, left hemisphere 86.6
Dentate gyrus
nTPM: 122.0
2010 Male, age 76, both hemispheres 170.9
2530 Female, age 94, left hemisphere 168.1
1927 Female, age 91, both hemispheres 146.3
2246 Female, age 85, both hemispheres 96.4
2528 Male, age 74, both hemispheres 76.5
2531 Female, age 67, both hemispheres 73.7
Entorhinal gyrus
nTPM: 90.3
1938 Female, age 85, left hemisphere 126.0
1787 Male, age 76, left hemisphere 99.0
2117 Female, age 91, right hemisphere 86.9
2764 Male, age 80, right hemisphere 80.4
2686 Male, age 75, right hemisphere 75.9
2613 Female, age 94, left hemisphere 73.3
Hippocampus, CA1
nTPM: 136.8
2749 Male, age 80, left hemisphere 209.4
1873 Female, age 85, both hemispheres 158.1
2045 Male, age 76, both hemispheres 121.3
2527 Male, age 74, both hemispheres 99.4
2082 Female, age 91, right hemisphere 95.6
Hippocampus, CA2
nTPM: 130.1
1892 Male, age 76, both hemispheres 189.1
1963 Male, age 80, left hemisphere 164.8
2437 Female, age 94, left hemisphere 112.9
1940 Female, age 85, left hemisphere 112.1
2249 Male, age 74, both hemispheres 100.8
2113 Female, age 91, right hemisphere 100.7
Hippocampus, CA3
nTPM: 118.5
2137 Male, age 80, left hemisphere 178.0
1867 Male, age 76, both hemispheres 137.7
2436 Male, age 74, both hemispheres 119.5
1891 Female, age 85, both hemispheres 101.9
2620 Female, age 94, left hemisphere 92.8
2861 Female, age 67, both hemispheres 81.2
Parahippocampal cortex
nTPM: 100.8
1850 Male, age 80, both hemispheres 130.5
2245 Female, age 91, both hemispheres 119.3
1933 Female, age 85, both hemispheres 117.3
2250 Female, age 67, right hemisphere 114.4
2018 Male, age 76, both hemispheres 109.0
1990 Female, age 91, right hemisphere 106.8
2693 Female, age 94, both hemispheres 94.8
2532 Female, age 72, left hemisphere 85.1
2692 Male, age 74, both hemispheres 68.1
2622 Female, age 67, right hemisphere 63.0
Perirhinal gyrus
nTPM: 122.1
1841 Female, age 85, right hemisphere 145.9
1847 Female, age 91, left hemisphere 143.6
1794 Male, age 80, right hemisphere 119.1
2521 Female, age 94, right hemisphere 101.4
2848 Male, age 76, right hemisphere 100.7
Subiculum
nTPM: 97.8
1901 Male, age 80, both hemispheres 120.1
2042 Male, age 76, both hemispheres 106.5
1977 Female, age 85, both hemispheres 103.0
2438 Female, age 94, left hemisphere 97.1
2619 Male, age 74, both hemispheres 86.8
2729 Female, age 91, right hemisphere 73.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 301.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 301.7
Samples: 197

Max nTPM: 931.8
Min nTPM: 84.7
Std nTPM: 117.9
Median nTPM: 294.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 931.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 699.7
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 614.8
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 571.3
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 564.4
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 556.2
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 532.2
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 524.9
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 522.2
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 516.8
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 506.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 483.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 483.5
FF:10169-103B7 60 years, female 578.4
FF:10153-102I9 76 years, female 388.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 341.1
Pig sample Sample description nTPM
Subiculum
nTPM: 282.1
Samples: 4

Max nTPM: 402.8
Min nTPM: 229.9
Sample A Female 402.8
Sample B Female 264.2
Sample C Male 229.9
Sample D Male 231.5
Dorsal hippocampus
nTPM: 341.2
Samples: 4

Max nTPM: 459.7
Min nTPM: 270.1
Sample A Female 459.7
Sample B Female 348.8
Sample C Male 286.0
Sample D Male 270.1
Entorhinal cortex
nTPM: 331.7
Samples: 4

Max nTPM: 384.1
Min nTPM: 267.2
Sample A Female 324.0
Sample B Female 384.1
Sample C Male 351.5
Sample D Male 267.2
Ventral hippocampus
nTPM: 304.3
Samples: 4

Max nTPM: 335.9
Min nTPM: 242.0
Sample A Female 309.8
Sample B Female 242.0
Sample C Male 329.5
Sample D Male 335.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 524.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 506.2
Samples: 4

Max nTPM: 526.6
Min nTPM: 473.9
Sample A Male 499.2
Sample B Male 526.6
Sample C Female 525.1
Sample D Female 473.9
Hippocampal formation
nTPM: 524.7
Samples: 4

Max nTPM: 565.2
Min nTPM: 478.5
Sample A Male 535.0
Sample B Male 478.5
Sample C Female 520.1
Sample D Female 565.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 15.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 15.6
69782533 Antisense, RP_050505_03_B12, Mouse strain C57BL/6J (56 days, male) 15.6

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