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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
781.8
nTPM
Monaco:
360.1
nTPM
Schmiedel:
338.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
781.8
HPA sample
nTPM
gdT-cell nTPM: 467.2
Samples: 6
Max nTPM: 521.4
Min nTPM: 373.0
P10809_1007
373.0
P10809_1022
457.4
P10809_1041
488.1
P10809_1060
521.4
P10809_1077
503.0
P10809_1098
460.5
MAIT T-cell nTPM: 470.5
Samples: 6
Max nTPM: 515.1
Min nTPM: 390.1
P10809_1006
390.1
P10809_1024
484.5
P10809_1043
431.0
P10809_1062
515.1
P10809_1083
488.5
P10809_1097
513.6
Memory CD4 T-cell nTPM: 507.6
Samples: 6
Max nTPM: 623.7
Min nTPM: 427.0
P10809_1014
461.8
P10809_1026
475.8
P10809_1045
427.0
P10809_1064
623.7
P10809_1086
545.6
P10809_1113
511.8
Memory CD8 T-cell nTPM: 501.7
Samples: 5
Max nTPM: 627.5
Min nTPM: 416.9
P10809_1012
466.0
P10809_1027
507.5
P10809_1046
416.9
P10809_1065
627.5
P10809_1111
490.8
Naive CD4 T-cell nTPM: 465.5
Samples: 6
Max nTPM: 539.2
Min nTPM: 396.0
P10809_1015
445.2
P10809_1030
396.0
P10809_1049
432.2
P10809_1068
539.2
P10809_1085
500.2
P10809_1112
480.0
Naive CD8 T-cell nTPM: 467.2
Samples: 6
Max nTPM: 543.9
Min nTPM: 401.2
P10809_1016
458.7
P10809_1031
401.2
P10809_1050
413.6
P10809_1069
542.2
P10809_1087
543.9
P10809_1110
443.6
T-reg nTPM: 781.8
Samples: 6
Max nTPM: 955.1
Min nTPM: 718.7
P10809_1018
730.1
P10809_1037
725.1
P10809_1056
838.2
P10809_1075
955.1
P10809_1094
718.7
P10809_1106
723.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
360.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 253.9
Samples: 4
Max nTPM: 382.4
Min nTPM: 161.1
RHH5202_R3573
271.7
RHH5230_R3602
161.1
RHH5259_R3631
200.3
RHH5288_R3660
382.4
Effector memory CD8 T-cell nTPM: 257.7
Samples: 4
Max nTPM: 303.7
Min nTPM: 198.9
RHH5203_R3574
289.2
RHH5231_R3603
303.7
RHH5260_R3632
198.9
RHH5289_R3661
238.9
MAIT T-cell nTPM: 264.6
Samples: 4
Max nTPM: 377.8
Min nTPM: 141.6
RHH5233_R3605
301.4
RHH5205_R3576
141.6
RHH5262_R3634
237.7
RHH5297_R3663
377.8
Memory CD4 T-cell TFH nTPM: 360.1
Samples: 4
Max nTPM: 501.6
Min nTPM: 274.1
RHH5300_R3666
339.3
RHH5236_R3608
501.6
RHH5265_R3637
274.1
RHH5208_R3579
325.3
Memory CD4 T-cell Th1 nTPM: 251.0
Samples: 4
Max nTPM: 433.7
Min nTPM: 164.0
RHH5210_R3581
224.0
RHH5302_R3668
433.7
RHH5238_R3610
182.3
RHH5267_R3639
164.0
Memory CD4 T-cell Th1/Th17 nTPM: 260.2
Samples: 4
Max nTPM: 455.2
Min nTPM: 124.8
RHH5303_R3669
455.2
RHH5211_R3582
275.5
RHH5239_R3611
124.8
RHH5268_R3640
185.1
Memory CD4 T-cell Th17 nTPM: 196.3
Samples: 4
Max nTPM: 261.7
Min nTPM: 136.2
RHH5304_R3670
210.6
RHH5212_R3583
261.7
RHH5240_R3612
176.8
RHH5269_R3641
136.2
Memory CD4 T-cell Th2 nTPM: 262.0
Samples: 4
Max nTPM: 337.3
Min nTPM: 194.6
RHH5305_R3671
295.4
RHH5213_R3584
220.6
RHH5241_R3613
337.3
RHH5270_R3642
194.6
Naive CD4 T-cell nTPM: 229.2
Samples: 4
Max nTPM: 311.7
Min nTPM: 151.4
RHH5306_R3672
261.7
RHH5214_R3585
311.7
RHH5242_R3614
191.9
RHH5271_R3643
151.4
Naive CD8 T-cell nTPM: 199.1
Samples: 4
Max nTPM: 277.4
Min nTPM: 95.8
RHH5201_R3572
237.2
RHH5229_R3601
95.8
RHH5258_R3630
277.4
RHH5287_R3659
186.0
Non-Vd2 gdTCR nTPM: 302.0
Samples: 4
Max nTPM: 409.0
Min nTPM: 154.6
RHH5235_R3607
154.6
RHH5264_R3636
372.8
RHH5207_R3578
271.5
RHH5299_R3665
409.0
T-reg nTPM: 309.2
Samples: 4
Max nTPM: 434.4
Min nTPM: 176.1
RHH5301_R3667
416.5
RHH5237_R3609
434.4
RHH5266_R3638
176.1
RHH5209_R3580
209.8
Terminal effector memory CD4 T-cell nTPM: 266.3
Samples: 2
Max nTPM: 387.7
Min nTPM: 144.9
RHH5243_R3615
144.9
RHH5272_R3644
387.7
Terminal effector memory CD8 T-cell nTPM: 352.3
Samples: 4
Max nTPM: 456.8
Min nTPM: 205.2
RHH5232_R3604
340.8
RHH5204_R3575
456.8
RHH5261_R3633
205.2
RHH5296_R3662
406.5
Vd2 gdTCR nTPM: 344.0
Samples: 4
Max nTPM: 431.6
Min nTPM: 217.1
RHH5234_R3606
313.1
RHH5206_R3577
431.6
RHH5263_R3635
217.1
RHH5298_R3664
414.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.