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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
242.5
nTPM
Monaco:
409.5
nTPM
Schmiedel:
506.9
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
242.5
HPA sample
nTPM
gdT-cell nTPM: 131.1
Samples: 6
Max nTPM: 153.3
Min nTPM: 90.3
P10809_1007
144.1
P10809_1022
131.9
P10809_1041
150.6
P10809_1060
116.2
P10809_1077
90.3
P10809_1098
153.3
MAIT T-cell nTPM: 101.0
Samples: 6
Max nTPM: 146.4
Min nTPM: 77.6
P10809_1006
82.9
P10809_1024
77.6
P10809_1043
146.4
P10809_1062
89.9
P10809_1083
86.4
P10809_1097
122.8
Memory CD4 T-cell nTPM: 169.7
Samples: 6
Max nTPM: 266.8
Min nTPM: 116.6
P10809_1014
187.7
P10809_1026
163.0
P10809_1045
266.8
P10809_1064
140.8
P10809_1086
116.6
P10809_1113
143.1
Memory CD8 T-cell nTPM: 134.9
Samples: 5
Max nTPM: 193.1
Min nTPM: 94.0
P10809_1012
138.0
P10809_1027
94.0
P10809_1046
193.1
P10809_1065
121.8
P10809_1111
127.4
Naive CD4 T-cell nTPM: 221.5
Samples: 6
Max nTPM: 329.6
Min nTPM: 168.8
P10809_1015
195.3
P10809_1030
168.8
P10809_1049
329.6
P10809_1068
206.8
P10809_1085
210.7
P10809_1112
217.8
Naive CD8 T-cell nTPM: 149.9
Samples: 6
Max nTPM: 186.0
Min nTPM: 100.7
P10809_1016
186.0
P10809_1031
118.8
P10809_1050
164.6
P10809_1069
170.9
P10809_1087
100.7
P10809_1110
158.5
T-reg nTPM: 242.5
Samples: 6
Max nTPM: 364.8
Min nTPM: 178.4
P10809_1018
254.9
P10809_1037
178.4
P10809_1056
364.8
P10809_1075
186.9
P10809_1094
270.4
P10809_1106
199.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
409.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 260.5
Samples: 4
Max nTPM: 413.6
Min nTPM: 184.0
RHH5202_R3573
205.8
RHH5230_R3602
413.6
RHH5259_R3631
184.0
RHH5288_R3660
238.4
Effector memory CD8 T-cell nTPM: 240.0
Samples: 4
Max nTPM: 367.7
Min nTPM: 149.2
RHH5203_R3574
198.6
RHH5231_R3603
367.7
RHH5260_R3632
244.6
RHH5289_R3661
149.2
MAIT T-cell nTPM: 158.8
Samples: 4
Max nTPM: 197.6
Min nTPM: 109.6
RHH5233_R3605
174.2
RHH5205_R3576
109.6
RHH5262_R3634
197.6
RHH5297_R3663
153.8
Memory CD4 T-cell TFH nTPM: 359.7
Samples: 4
Max nTPM: 492.9
Min nTPM: 221.1
RHH5300_R3666
398.0
RHH5236_R3608
492.9
RHH5265_R3637
326.8
RHH5208_R3579
221.1
Memory CD4 T-cell Th1 nTPM: 307.0
Samples: 4
Max nTPM: 317.8
Min nTPM: 296.8
RHH5210_R3581
311.2
RHH5302_R3668
302.3
RHH5238_R3610
317.8
RHH5267_R3639
296.8
Memory CD4 T-cell Th1/Th17 nTPM: 241.8
Samples: 4
Max nTPM: 307.2
Min nTPM: 157.5
RHH5303_R3669
221.0
RHH5211_R3582
281.4
RHH5239_R3611
157.5
RHH5268_R3640
307.2
Memory CD4 T-cell Th17 nTPM: 282.7
Samples: 4
Max nTPM: 372.9
Min nTPM: 205.7
RHH5304_R3670
205.7
RHH5212_R3583
372.9
RHH5240_R3612
235.1
RHH5269_R3641
316.9
Memory CD4 T-cell Th2 nTPM: 345.7
Samples: 4
Max nTPM: 381.8
Min nTPM: 312.3
RHH5305_R3671
350.6
RHH5213_R3584
312.3
RHH5241_R3613
337.9
RHH5270_R3642
381.8
Naive CD4 T-cell nTPM: 409.6
Samples: 4
Max nTPM: 477.5
Min nTPM: 316.7
RHH5306_R3672
477.5
RHH5214_R3585
402.4
RHH5242_R3614
441.6
RHH5271_R3643
316.7
Naive CD8 T-cell nTPM: 288.0
Samples: 4
Max nTPM: 374.6
Min nTPM: 211.4
RHH5201_R3572
211.4
RHH5229_R3601
239.6
RHH5258_R3630
374.6
RHH5287_R3659
326.4
Non-Vd2 gdTCR nTPM: 184.2
Samples: 4
Max nTPM: 232.3
Min nTPM: 147.3
RHH5235_R3607
205.7
RHH5264_R3636
147.3
RHH5207_R3578
151.6
RHH5299_R3665
232.3
T-reg nTPM: 368.7
Samples: 4
Max nTPM: 494.8
Min nTPM: 263.7
RHH5301_R3667
425.5
RHH5237_R3609
494.8
RHH5266_R3638
290.6
RHH5209_R3580
263.7
Terminal effector memory CD4 T-cell nTPM: 234.1
Samples: 2
Max nTPM: 234.7
Min nTPM: 233.4
RHH5243_R3615
234.7
RHH5272_R3644
233.4
Terminal effector memory CD8 T-cell nTPM: 194.5
Samples: 4
Max nTPM: 253.1
Min nTPM: 155.6
RHH5232_R3604
253.1
RHH5204_R3575
188.0
RHH5261_R3633
181.1
RHH5296_R3662
155.6
Vd2 gdTCR nTPM: 260.5
Samples: 4
Max nTPM: 311.9
Min nTPM: 206.3
RHH5234_R3606
272.9
RHH5206_R3577
311.9
RHH5263_R3635
206.3
RHH5298_R3664
250.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.