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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
185.6
nTPM
Monaco:
288.7
nTPM
Schmiedel:
119.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
185.6
HPA sample
nTPM
gdT-cell nTPM: 127.6
Samples: 6
Max nTPM: 151.9
Min nTPM: 93.6
P10809_1007
93.6
P10809_1022
151.9
P10809_1041
133.0
P10809_1060
135.1
P10809_1077
120.3
P10809_1098
131.5
MAIT T-cell nTPM: 136.4
Samples: 6
Max nTPM: 158.7
Min nTPM: 105.8
P10809_1006
105.8
P10809_1024
157.3
P10809_1043
158.7
P10809_1062
124.0
P10809_1083
131.9
P10809_1097
140.4
Memory CD4 T-cell nTPM: 122.1
Samples: 6
Max nTPM: 153.4
Min nTPM: 92.3
P10809_1014
92.3
P10809_1026
133.4
P10809_1045
153.4
P10809_1064
121.1
P10809_1086
113.1
P10809_1113
119.2
Memory CD8 T-cell nTPM: 140.0
Samples: 5
Max nTPM: 160.8
Min nTPM: 108.8
P10809_1012
108.8
P10809_1027
160.8
P10809_1046
160.4
P10809_1065
129.2
P10809_1111
140.7
Naive CD4 T-cell nTPM: 146.2
Samples: 6
Max nTPM: 199.0
Min nTPM: 98.8
P10809_1015
98.8
P10809_1030
149.0
P10809_1049
199.0
P10809_1068
147.2
P10809_1085
140.0
P10809_1112
143.3
Naive CD8 T-cell nTPM: 160.7
Samples: 6
Max nTPM: 198.2
Min nTPM: 121.1
P10809_1016
136.8
P10809_1031
155.2
P10809_1050
198.2
P10809_1069
183.0
P10809_1087
121.1
P10809_1110
170.0
T-reg nTPM: 185.6
Samples: 6
Max nTPM: 261.3
Min nTPM: 137.7
P10809_1018
155.8
P10809_1037
203.5
P10809_1056
261.3
P10809_1075
137.7
P10809_1094
183.7
P10809_1106
171.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
288.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 173.3
Samples: 4
Max nTPM: 235.4
Min nTPM: 109.7
RHH5202_R3573
235.4
RHH5230_R3602
154.7
RHH5259_R3631
109.7
RHH5288_R3660
193.3
Effector memory CD8 T-cell nTPM: 212.4
Samples: 4
Max nTPM: 255.4
Min nTPM: 164.6
RHH5203_R3574
255.4
RHH5231_R3603
198.1
RHH5260_R3632
164.6
RHH5289_R3661
231.3
MAIT T-cell nTPM: 194.6
Samples: 4
Max nTPM: 221.2
Min nTPM: 156.2
RHH5233_R3605
190.8
RHH5205_R3576
156.2
RHH5262_R3634
221.2
RHH5297_R3663
210.3
Memory CD4 T-cell TFH nTPM: 180.7
Samples: 4
Max nTPM: 217.2
Min nTPM: 142.9
RHH5300_R3666
161.6
RHH5236_R3608
200.9
RHH5265_R3637
217.2
RHH5208_R3579
142.9
Memory CD4 T-cell Th1 nTPM: 173.7
Samples: 4
Max nTPM: 214.9
Min nTPM: 123.9
RHH5210_R3581
202.7
RHH5302_R3668
214.9
RHH5238_R3610
123.9
RHH5267_R3639
153.3
Memory CD4 T-cell Th1/Th17 nTPM: 160.1
Samples: 4
Max nTPM: 226.5
Min nTPM: 84.8
RHH5303_R3669
226.5
RHH5211_R3582
174.5
RHH5239_R3611
84.8
RHH5268_R3640
154.7
Memory CD4 T-cell Th17 nTPM: 151.4
Samples: 4
Max nTPM: 194.0
Min nTPM: 119.8
RHH5304_R3670
170.3
RHH5212_R3583
194.0
RHH5240_R3612
119.8
RHH5269_R3641
121.4
Memory CD4 T-cell Th2 nTPM: 211.3
Samples: 4
Max nTPM: 230.4
Min nTPM: 199.8
RHH5305_R3671
230.4
RHH5213_R3584
214.2
RHH5241_R3613
199.8
RHH5270_R3642
200.8
Naive CD4 T-cell nTPM: 230.8
Samples: 4
Max nTPM: 310.1
Min nTPM: 155.2
RHH5306_R3672
254.1
RHH5214_R3585
310.1
RHH5242_R3614
155.2
RHH5271_R3643
203.8
Naive CD8 T-cell nTPM: 288.7
Samples: 4
Max nTPM: 358.9
Min nTPM: 137.2
RHH5201_R3572
358.9
RHH5229_R3601
137.2
RHH5258_R3630
325.4
RHH5287_R3659
333.4
Non-Vd2 gdTCR nTPM: 248.4
Samples: 4
Max nTPM: 301.5
Min nTPM: 165.6
RHH5235_R3607
165.6
RHH5264_R3636
301.5
RHH5207_R3578
265.9
RHH5299_R3665
260.4
T-reg nTPM: 213.7
Samples: 4
Max nTPM: 248.1
Min nTPM: 160.5
RHH5301_R3667
233.0
RHH5237_R3609
248.1
RHH5266_R3638
160.5
RHH5209_R3580
213.1
Terminal effector memory CD4 T-cell nTPM: 200.7
Samples: 2
Max nTPM: 222.4
Min nTPM: 179.0
RHH5243_R3615
179.0
RHH5272_R3644
222.4
Terminal effector memory CD8 T-cell nTPM: 230.4
Samples: 4
Max nTPM: 265.6
Min nTPM: 176.2
RHH5232_R3604
265.6
RHH5204_R3575
241.0
RHH5261_R3633
176.2
RHH5296_R3662
238.7
Vd2 gdTCR nTPM: 207.5
Samples: 4
Max nTPM: 246.8
Min nTPM: 170.1
RHH5234_R3606
231.8
RHH5206_R3577
246.8
RHH5263_R3635
170.1
RHH5298_R3664
181.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
