HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni
Consensus:117.9 nTPM
HPA Brain:111.4 nTPM
GTEx:117.9 nTPM
FANTOM5:60.5 Scaled Tags Per Million
Pig:69.4 nTPM
Mouse:121.3 nTPM
Allen mouse:9.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA057771
Glial cells Not detected
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 111.4
Sample id Sample description nTPM
Hippocampus
nTPM: 102.0
2529 Female, age 94, left hemisphere 128.6
2621 Female, age 67, right hemisphere 110.8
2148 Female, age 91, left hemisphere 103.1
1855 Male, age 76, left hemisphere 94.2
1911 Female, age 85, right hemisphere 88.2
1898 Male, age 80, left hemisphere 86.8
Dentate gyrus
nTPM: 82.7
2246 Female, age 85, both hemispheres 107.9
2530 Female, age 94, left hemisphere 90.2
1927 Female, age 91, both hemispheres 76.2
2531 Female, age 67, both hemispheres 75.1
2528 Male, age 74, both hemispheres 74.1
2010 Male, age 76, both hemispheres 72.8
Entorhinal gyrus
nTPM: 105.3
1787 Male, age 76, left hemisphere 139.3
1938 Female, age 85, left hemisphere 125.0
2686 Male, age 75, right hemisphere 103.8
2117 Female, age 91, right hemisphere 99.3
2764 Male, age 80, right hemisphere 82.6
2613 Female, age 94, left hemisphere 81.9
Hippocampus, CA1
nTPM: 97.1
2527 Male, age 74, both hemispheres 141.2
2749 Male, age 80, left hemisphere 119.6
2082 Female, age 91, right hemisphere 91.9
1873 Female, age 85, both hemispheres 66.4
2045 Male, age 76, both hemispheres 66.4
Hippocampus, CA2
nTPM: 96.8
2249 Male, age 74, both hemispheres 113.4
1940 Female, age 85, left hemisphere 110.7
2437 Female, age 94, left hemisphere 101.4
2113 Female, age 91, right hemisphere 94.7
1963 Male, age 80, left hemisphere 87.1
1892 Male, age 76, both hemispheres 73.4
Hippocampus, CA3
nTPM: 79.0
2861 Female, age 67, both hemispheres 98.3
2436 Male, age 74, both hemispheres 93.3
1867 Male, age 76, both hemispheres 77.7
1891 Female, age 85, both hemispheres 74.4
2137 Male, age 80, left hemisphere 74.2
2620 Female, age 94, left hemisphere 56.3
Parahippocampal cortex
nTPM: 111.4
2250 Female, age 67, right hemisphere 162.7
1933 Female, age 85, both hemispheres 128.5
2692 Male, age 74, both hemispheres 128.2
2622 Female, age 67, right hemisphere 124.7
2245 Female, age 91, both hemispheres 124.3
2532 Female, age 72, left hemisphere 104.8
2693 Female, age 94, both hemispheres 97.9
1990 Female, age 91, right hemisphere 96.0
2018 Male, age 76, both hemispheres 74.6
1850 Male, age 80, both hemispheres 72.1
Perirhinal gyrus
nTPM: 98.9
2521 Female, age 94, right hemisphere 134.8
1847 Female, age 91, left hemisphere 100.8
1794 Male, age 80, right hemisphere 95.2
1841 Female, age 85, right hemisphere 86.0
2848 Male, age 76, right hemisphere 77.7
Subiculum
nTPM: 88.3
2438 Female, age 94, left hemisphere 115.7
2619 Male, age 74, both hemispheres 101.4
1977 Female, age 85, both hemispheres 99.4
2729 Female, age 91, right hemisphere 86.8
1901 Male, age 80, both hemispheres 69.4
2042 Male, age 76, both hemispheres 57.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 117.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 117.9
Samples: 197

Max nTPM: 312.2
Min nTPM: 25.7
Std nTPM: 56.0
Median nTPM: 109.8
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 312.2
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 307.7
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 284.4
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 276.2
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 272.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 271.9
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 244.8
GTEX-1C64N-0011-R1b-SM-7P8Q7 50-59 years, male 242.9
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 242.1
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 232.6
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 232.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 60.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 60.5
FF:10169-103B7 60 years, female 62.3
FF:10153-102I9 76 years, female 58.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 69.4
Pig sample Sample description nTPM
Subiculum
nTPM: 61.3
Samples: 4

Max nTPM: 75.9
Min nTPM: 50.9
Sample A Female 75.9
Sample B Female 59.3
Sample C Male 59.0
Sample D Male 50.9
Dorsal hippocampus
nTPM: 41.3
Samples: 4

Max nTPM: 47.0
Min nTPM: 33.4
Sample A Female 45.8
Sample B Female 47.0
Sample C Male 38.9
Sample D Male 33.4
Entorhinal cortex
nTPM: 69.4
Samples: 4

Max nTPM: 82.8
Min nTPM: 61.6
Sample A Female 82.8
Sample B Female 61.6
Sample C Male 68.0
Sample D Male 65.2
Ventral hippocampus
nTPM: 54.8
Samples: 4

Max nTPM: 77.3
Min nTPM: 42.4
Sample A Female 48.6
Sample B Female 51.0
Sample C Male 77.3
Sample D Male 42.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 121.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 121.3
Samples: 4

Max nTPM: 141.0
Min nTPM: 98.7
Sample A Male 114.0
Sample B Male 141.0
Sample C Female 98.7
Sample D Female 131.6
Hippocampal formation
nTPM: 46.1
Samples: 4

Max nTPM: 58.4
Min nTPM: 34.9
Sample A Male 55.1
Sample B Male 36.1
Sample C Female 34.9
Sample D Female 58.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.1
71717155 Antisense, RP_050524_03_C10, Mouse strain C57BL/6J (56 days, male) 9.1
70228328 Antisense, RP_050524_03_C10, Mouse strain C57BL/6J (56 days, male) 5.1

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