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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
20.4
nTPM
Monaco:
99.6
nTPM
Schmiedel:
236.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
20.4
HPA sample
nTPM
gdT-cell nTPM: 18.4
Samples: 6
Max nTPM: 45.0
Min nTPM: 5.1
P10809_1007
45.0
P10809_1022
10.8
P10809_1041
17.2
P10809_1060
5.1
P10809_1077
12.1
P10809_1098
20.1
MAIT T-cell nTPM: 10.7
Samples: 6
Max nTPM: 20.9
Min nTPM: 1.2
P10809_1006
20.9
P10809_1024
1.2
P10809_1043
12.5
P10809_1062
5.4
P10809_1083
10.7
P10809_1097
13.7
Memory CD4 T-cell nTPM: 11.8
Samples: 6
Max nTPM: 23.2
Min nTPM: 3.8
P10809_1014
23.2
P10809_1026
12.7
P10809_1045
15.0
P10809_1064
9.4
P10809_1086
6.6
P10809_1113
3.8
Memory CD8 T-cell nTPM: 20.4
Samples: 5
Max nTPM: 31.8
Min nTPM: 11.9
P10809_1012
31.8
P10809_1027
12.5
P10809_1046
31.5
P10809_1065
11.9
P10809_1111
14.1
Naive CD4 T-cell nTPM: 9.7
Samples: 6
Max nTPM: 14.8
Min nTPM: 5.4
P10809_1015
14.8
P10809_1030
7.7
P10809_1049
13.6
P10809_1068
7.2
P10809_1085
9.7
P10809_1112
5.4
Naive CD8 T-cell nTPM: 11.8
Samples: 6
Max nTPM: 16.5
Min nTPM: 4.8
P10809_1016
9.3
P10809_1031
11.8
P10809_1050
15.8
P10809_1069
16.5
P10809_1087
4.8
P10809_1110
12.7
T-reg nTPM: 9.2
Samples: 6
Max nTPM: 26.4
Min nTPM: 0.8
P10809_1018
6.7
P10809_1037
7.0
P10809_1056
26.4
P10809_1075
5.7
P10809_1094
0.8
P10809_1106
8.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
99.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 95.7
Samples: 4
Max nTPM: 208.9
Min nTPM: 8.5
RHH5202_R3573
8.5
RHH5230_R3602
208.9
RHH5259_R3631
154.5
RHH5288_R3660
10.9
Effector memory CD8 T-cell nTPM: 99.7
Samples: 4
Max nTPM: 292.7
Min nTPM: 11.6
RHH5203_R3574
22.1
RHH5231_R3603
72.2
RHH5260_R3632
292.7
RHH5289_R3661
11.6
MAIT T-cell nTPM: 46.9
Samples: 4
Max nTPM: 132.1
Min nTPM: 10.8
RHH5233_R3605
10.8
RHH5205_R3576
21.3
RHH5262_R3634
132.1
RHH5297_R3663
23.4
Memory CD4 T-cell TFH nTPM: 53.3
Samples: 4
Max nTPM: 150.2
Min nTPM: 4.1
RHH5300_R3666
51.4
RHH5236_R3608
150.2
RHH5265_R3637
7.4
RHH5208_R3579
4.1
Memory CD4 T-cell Th1 nTPM: 92.3
Samples: 4
Max nTPM: 198.3
Min nTPM: 10.1
RHH5210_R3581
12.8
RHH5302_R3668
10.1
RHH5238_R3610
147.9
RHH5267_R3639
198.3
Memory CD4 T-cell Th1/Th17 nTPM: 54.6
Samples: 4
Max nTPM: 179.4
Min nTPM: 5.0
RHH5303_R3669
5.0
RHH5211_R3582
25.5
RHH5239_R3611
8.5
RHH5268_R3640
179.4
Memory CD4 T-cell Th17 nTPM: 65.7
Samples: 4
Max nTPM: 147.3
Min nTPM: 4.4
RHH5304_R3670
4.4
RHH5212_R3583
105.9
RHH5240_R3612
5.0
RHH5269_R3641
147.3
Memory CD4 T-cell Th2 nTPM: 54.0
Samples: 4
Max nTPM: 154.2
Min nTPM: 10.9
RHH5305_R3671
12.8
RHH5213_R3584
38.0
RHH5241_R3613
10.9
RHH5270_R3642
154.2
Naive CD4 T-cell nTPM: 52.9
Samples: 4
Max nTPM: 134.0
Min nTPM: 6.6
RHH5306_R3672
50.1
RHH5214_R3585
134.0
RHH5242_R3614
6.6
RHH5271_R3643
21.0
Naive CD8 T-cell nTPM: 69.6
Samples: 4
Max nTPM: 232.3
Min nTPM: 3.5
RHH5201_R3572
3.5
RHH5229_R3601
232.3
RHH5258_R3630
27.2
RHH5287_R3659
15.5
Non-Vd2 gdTCR nTPM: 72.7
Samples: 4
Max nTPM: 180.7
Min nTPM: 9.6
RHH5235_R3607
180.7
RHH5264_R3636
14.8
RHH5207_R3578
9.6
RHH5299_R3665
85.5
T-reg nTPM: 66.3
Samples: 4
Max nTPM: 121.5
Min nTPM: 27.7
RHH5301_R3667
27.7
RHH5237_R3609
121.5
RHH5266_R3638
69.3
RHH5209_R3580
46.7
Terminal effector memory CD4 T-cell nTPM: 43.8
Samples: 2
Max nTPM: 70.9
Min nTPM: 16.7
RHH5243_R3615
70.9
RHH5272_R3644
16.7
Terminal effector memory CD8 T-cell nTPM: 85.2
Samples: 4
Max nTPM: 296.4
Min nTPM: 4.2
RHH5232_R3604
15.4
RHH5204_R3575
24.6
RHH5261_R3633
296.4
RHH5296_R3662
4.2
Vd2 gdTCR nTPM: 32.6
Samples: 4
Max nTPM: 48.1
Min nTPM: 18.4
RHH5234_R3606
33.3
RHH5206_R3577
18.4
RHH5263_R3635
30.5
RHH5298_R3664
48.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
