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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
218.5
nTPM
Monaco:
64.2
nTPM
Schmiedel:
80.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
218.5
HPA sample
nTPM
gdT-cell nTPM: 106.7
Samples: 6
Max nTPM: 139.7
Min nTPM: 71.8
P10809_1007
71.8
P10809_1022
101.8
P10809_1041
133.2
P10809_1060
101.0
P10809_1077
139.7
P10809_1098
92.6
MAIT T-cell nTPM: 134.7
Samples: 6
Max nTPM: 163.2
Min nTPM: 73.5
P10809_1006
73.5
P10809_1024
151.3
P10809_1043
132.6
P10809_1062
147.8
P10809_1083
163.2
P10809_1097
139.7
Memory CD4 T-cell nTPM: 167.9
Samples: 6
Max nTPM: 203.8
Min nTPM: 119.0
P10809_1014
119.0
P10809_1026
203.8
P10809_1045
161.8
P10809_1064
180.1
P10809_1086
180.8
P10809_1113
162.0
Memory CD8 T-cell nTPM: 132.1
Samples: 5
Max nTPM: 176.8
Min nTPM: 92.1
P10809_1012
92.1
P10809_1027
127.1
P10809_1046
130.6
P10809_1065
134.0
P10809_1111
176.8
Naive CD4 T-cell nTPM: 115.7
Samples: 6
Max nTPM: 152.3
Min nTPM: 90.7
P10809_1015
90.7
P10809_1030
120.9
P10809_1049
128.0
P10809_1068
109.8
P10809_1085
152.3
P10809_1112
92.4
Naive CD8 T-cell nTPM: 114.7
Samples: 6
Max nTPM: 139.1
Min nTPM: 88.1
P10809_1016
88.1
P10809_1031
115.4
P10809_1050
115.4
P10809_1069
139.1
P10809_1087
133.7
P10809_1110
96.2
T-reg nTPM: 218.5
Samples: 6
Max nTPM: 248.0
Min nTPM: 157.1
P10809_1018
157.1
P10809_1037
246.2
P10809_1056
247.2
P10809_1075
218.6
P10809_1094
193.6
P10809_1106
248.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
64.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 38.6
Samples: 4
Max nTPM: 41.8
Min nTPM: 35.8
RHH5202_R3573
37.9
RHH5230_R3602
38.7
RHH5259_R3631
41.8
RHH5288_R3660
35.8
Effector memory CD8 T-cell nTPM: 35.2
Samples: 4
Max nTPM: 38.1
Min nTPM: 31.7
RHH5203_R3574
33.2
RHH5231_R3603
31.7
RHH5260_R3632
38.1
RHH5289_R3661
37.9
MAIT T-cell nTPM: 37.5
Samples: 4
Max nTPM: 48.0
Min nTPM: 20.3
RHH5233_R3605
20.3
RHH5205_R3576
42.7
RHH5262_R3634
48.0
RHH5297_R3663
38.8
Memory CD4 T-cell TFH nTPM: 42.2
Samples: 4
Max nTPM: 56.6
Min nTPM: 31.7
RHH5300_R3666
40.0
RHH5236_R3608
56.6
RHH5265_R3637
40.4
RHH5208_R3579
31.7
Memory CD4 T-cell Th1 nTPM: 58.1
Samples: 4
Max nTPM: 73.0
Min nTPM: 35.5
RHH5210_R3581
35.5
RHH5302_R3668
73.0
RHH5238_R3610
69.7
RHH5267_R3639
54.0
Memory CD4 T-cell Th1/Th17 nTPM: 50.6
Samples: 4
Max nTPM: 51.1
Min nTPM: 50.1
RHH5303_R3669
50.1
RHH5211_R3582
50.8
RHH5239_R3611
50.2
RHH5268_R3640
51.1
Memory CD4 T-cell Th17 nTPM: 61.4
Samples: 4
Max nTPM: 80.9
Min nTPM: 48.5
RHH5304_R3670
48.5
RHH5212_R3583
63.6
RHH5240_R3612
80.9
RHH5269_R3641
52.6
Memory CD4 T-cell Th2 nTPM: 64.2
Samples: 4
Max nTPM: 83.8
Min nTPM: 44.8
RHH5305_R3671
83.8
RHH5213_R3584
65.2
RHH5241_R3613
63.1
RHH5270_R3642
44.8
Naive CD4 T-cell nTPM: 57.9
Samples: 4
Max nTPM: 69.0
Min nTPM: 41.8
RHH5306_R3672
69.0
RHH5214_R3585
66.6
RHH5242_R3614
41.8
RHH5271_R3643
54.3
Naive CD8 T-cell nTPM: 44.1
Samples: 4
Max nTPM: 58.3
Min nTPM: 36.6
RHH5201_R3572
36.6
RHH5229_R3601
58.3
RHH5258_R3630
43.6
RHH5287_R3659
37.9
Non-Vd2 gdTCR nTPM: 31.7
Samples: 4
Max nTPM: 40.0
Min nTPM: 19.0
RHH5235_R3607
19.0
RHH5264_R3636
32.0
RHH5207_R3578
40.0
RHH5299_R3665
35.8
T-reg nTPM: 60.9
Samples: 4
Max nTPM: 65.0
Min nTPM: 59.2
RHH5301_R3667
59.6
RHH5237_R3609
65.0
RHH5266_R3638
59.6
RHH5209_R3580
59.2
Terminal effector memory CD4 T-cell nTPM: 42.6
Samples: 2
Max nTPM: 46.5
Min nTPM: 38.7
RHH5243_R3615
46.5
RHH5272_R3644
38.7
Terminal effector memory CD8 T-cell nTPM: 41.0
Samples: 4
Max nTPM: 63.7
Min nTPM: 24.8
RHH5232_R3604
30.4
RHH5204_R3575
63.7
RHH5261_R3633
44.9
RHH5296_R3662
24.8
Vd2 gdTCR nTPM: 42.9
Samples: 4
Max nTPM: 64.4
Min nTPM: 21.5
RHH5234_R3606
21.5
RHH5206_R3577
64.4
RHH5263_R3635
35.0
RHH5298_R3664
50.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
