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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
212.5
nTPM
FANTOM5:
490.0
Scaled Tags Per Million
Pig:
332.2
nTPM
Allen mouse:
16.5
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
212.5
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 117.2
1984
Male, age 76, both hemispheres
152.5
2301
Female, age 85, both hemispheres
123.9
2090
Male, age 80, both hemispheres
99.2
2188
Female, age 91, both hemispheres
93.0
Dorsal cochlear nucleus nTPM: 130.2
2058
Male, age 76, both hemispheres
156.0
2370
Male, age 61, both hemispheres
145.3
2802
Male, age 74, right hemisphere
131.1
2187
Female, age 91, both hemispheres
118.6
2378
Male, age 80, both hemispheres
99.9
Dorsal tegmental nucleus nTPM: 144.3
2358
Male, age 61, both hemispheres
167.6
2083
Male, age 80, both hemispheres
164.7
1936
Male, age 76, left hemisphere
131.9
2326
Male, age 74, both hemispheres
113.0
Dorsolateral tegmental area nTPM: 136.0
2654
Male, age 80, both hemispheres
161.1
2141
Male, age 76, both hemispheres
147.3
2751
Female, age 85, both hemispheres
132.1
2360
Male, age 74, both hemispheres
120.8
2337
Male, age 61, both hemispheres
118.8
Kolliker-Fuse nucleus nTPM: 148.5
2163
Male, age 80, both hemispheres
221.9
2793
Female, age 91, left hemisphere
113.3
2315
Male, age 76, right hemisphere
110.1
Lateral lemniscal nuclei nTPM: 185.1
2036
Male, age 80, both hemispheres
231.5
2169
Male, age 76, both hemispheres
212.7
2453
Male, age 74, right hemisphere
183.0
2746
Female, age 85, left hemisphere
178.6
2320
Female, age 91, left hemisphere
120.0
Lateral parabrachial nucleus nTPM: 149.3
2139
Female, age 85, right hemisphere
202.8
2790
Male, age 61, both hemispheres
170.6
2013
Male, age 80, both hemispheres
143.1
2792
Male, age 76, both hemispheres
80.5
Lateral vestibular nucleus nTPM: 159.9
2184
Male, age 76, both hemispheres
195.1
2311
Male, age 80, both hemispheres
124.6
Locus coeruleus nTPM: 212.5
2123
Female, age 91, both hemispheres
312.0
2014
Male, age 55, unknown
228.8
2720
Male, age 74, both hemispheres
216.4
1980
Male, age 76, both hemispheres
198.2
2317
Female, age 72, unknown
192.9
2162
Male, age 80, both hemispheres
188.9
2788
Male, age 74, unknown
150.1
Medial parabrachial nucleus nTPM: 153.0
2156
Male, age 61, both hemispheres
184.8
2854
Male, age 80, both hemispheres
160.2
2170
Female, age 91, both hemispheres
143.3
2463
Female, age 85, right hemisphere
138.7
2786
Male, age 76, both hemispheres
138.0
Medial periolivary nuclei nTPM: 180.5
2171
Female, age 85, both hemispheres
264.0
2063
Male, age 76, both hemispheres
243.5
2791
Male, age 74, right hemisphere
153.8
2081
Male, age 80, both hemispheres
122.7
2458
Female, age 91, both hemispheres
118.7
Motor facial nucleus nTPM: 178.7
2062
Male, age 76, both hemispheres
263.4
2365
Male, age 74, right hemisphere
185.0
2795
Female, age 91, both hemispheres
164.7
2697
Female, age 85, both hemispheres
159.7
2327
Male, age 80, both hemispheres
157.4
2126
Male, age 61, both hemispheres
141.9
Motor trigeminal nucleus nTPM: 147.8
2079
Male, age 80, both hemispheres
178.8
2335
Male, age 61, both hemispheres
162.8
2560
Male, age 74, both hemispheres
156.6
2309
Male, age 76, both hemispheres
133.3
2321
Female, age 91, both hemispheres
107.4
Nuclei of the trapezoid body nTPM: 204.7
2735
Female, age 85, both hemispheres
266.2
2159
Male, age 61, both hemispheres
232.5
1983
Male, age 76, both hemispheres
224.9
2368
Female, age 91, both hemispheres
150.1
2166
Male, age 80, both hemispheres
149.9
Nucleus raphe magnus nTPM: 211.9
2160
Male, age 61, both hemispheres
292.2
2172
Female, age 85, both hemispheres
267.9
2455
Male, age 74, both hemispheres
223.5
2051
Male, age 76, both hemispheres
193.4
2328
Male, age 80, both hemispheres
158.7
2459
Female, age 91, both hemispheres
135.6
Paramedian reticular nucleus nTPM: 185.1
2050
Female, age 85, both hemispheres
224.3
2313
Male, age 61, both hemispheres
214.8
2057
Male, age 80, both hemispheres
200.3
2052
Male, age 76, both hemispheres
100.9
Pedunculopontine tegmental nucleus nTPM: 153.4
1921
Female, age 85, both hemispheres
181.8
2334
Male, age 80, both hemispheres
152.0
2338
Male, age 61, both hemispheres
126.3
Pontine nuclei nTPM: 204.3
2787
Female, age 85, both hemispheres
299.9
1863
Male, age 55, unknown
279.1
2727
Male, age 61, right hemisphere
252.9
1968
Male, age 76, left hemisphere
221.3
2109
Female, age 72, unknown
206.4
2115
Male, age 80, left hemisphere
140.6
2454
Male, age 74, left hemisphere
134.4
2319
Female, age 91, both hemispheres
100.1
Pontine raphe nucleus nTPM: 189.4
2122
Female, age 85, midline
211.4
2853
Male, age 76, midline
167.4
Posteroventral cochlear nucleus nTPM: 119.5
2752
Female, age 85, both hemispheres
184.5
2070
Male, age 76, both hemispheres
135.4
2371
Male, age 61, both hemispheres
130.0
2341
Male, age 80, both hemispheres
86.0
2135
Female, age 91, both hemispheres
61.4
Principal sensory trigeminal nucleus nTPM: 185.1
2158
Male, age 61, both hemispheres
242.9
2008
Male, age 80, left hemisphere
237.9
2324
Male, age 76, both hemispheres
160.3
2367
Female, age 91, left hemisphere
99.2
Reticular pontine nucleus, caudal nTPM: 145.3
2332
Male, age 80, right hemisphere
187.0
2092
Male, age 76, both hemispheres
165.4
2559
Male, age 74, both hemispheres
115.7
2457
Female, age 91, both hemispheres
112.9
Reticular pontine nucleus, oral nTPM: 161.2
2012
Female, age 85, both hemispheres
200.8
2361
Male, age 74, both hemispheres
189.3
1939
Male, age 80, both hemispheres
167.0
2167
Male, age 76, both hemispheres
150.6
2366
Female, age 91, both hemispheres
98.1
Reticulotegmental nucleus nTPM: 153.2
2325
Male, age 76, both hemispheres
184.4
2452
Male, age 74, both hemispheres
156.6
2333
Male, age 80, both hemispheres
143.2
2322
Female, age 91, both hemispheres
128.6
Spinal trigeminal nucleus, oral nTPM: 168.7
2737
Female, age 85, both hemispheres
195.9
2164
Male, age 80, both hemispheres
161.3
1978
Male, age 76, both hemispheres
148.8
Subcoeruleus area nTPM: 155.6
2323
Female, age 91, left hemisphere
196.0
1958
Male, age 80, both hemispheres
182.7
2089
Male, age 76, left hemisphere
154.2
2451
Male, age 74, both hemispheres
130.0
2369
Female, age 85, left hemisphere
114.9
Superior olive nTPM: 174.4
1875
Female, age 85, both hemispheres
245.7
2364
Male, age 74, right hemisphere
175.3
2020
Male, age 76, both hemispheres
167.0
2329
Male, age 80, right hemisphere
145.9
2561
Female, age 91, both hemispheres
138.0
Ventral periolivary nuclei nTPM: 188.7
2130
Female, age 85, both hemispheres
247.3
2165
Male, age 80, both hemispheres
208.5
2794
Female, age 91, left hemisphere
150.8
2023
Male, age 76, both hemispheres
148.3
Ventrolateral tegmental area, A5 NE cell group nTPM: 162.4
2449
Male, age 74, both hemispheres
185.0
2840
Female, age 85, both hemispheres
181.7
1959
Male, age 76, both hemispheres
175.4
2359
Male, age 61, both hemispheres
167.9
2161
Male, age 80, both hemispheres
144.4
2456
Female, age 91, both hemispheres
120.3
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
332.2
Pig sample
Sample description
nTPM
Pons nTPM: 332.2
Samples: 4
Max nTPM: 445.0
Min nTPM: 285.5
Sample A
Female
445.0
Sample B
Female
288.1
Sample C
Male
285.5
Sample D
Male
310.3
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
