HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:173.2 nTPM
HPA Brain:286.7 nTPM
GTEx:173.2 nTPM
FANTOM5:418.7 Scaled Tags Per Million
Pig:308.6 nTPM
Mouse:370.9 nTPM
Allen mouse:25.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA024305Antibody HPA052171Antibody CAB018655Antibody CAB040563Antibody CAB080077
Glial cells Not detectedMediumLowLowMedium
Neuronal cells MediumMediumMediumMediumNot detected










HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 286.7
Sample id Sample description nTPM
Hippocampus
nTPM: 193.3
1898 Male, age 80, left hemisphere 268.0
2621 Female, age 67, right hemisphere 207.0
1855 Male, age 76, left hemisphere 194.2
2148 Female, age 91, left hemisphere 186.7
2529 Female, age 94, left hemisphere 158.0
1911 Female, age 85, right hemisphere 145.7
Dentate gyrus
nTPM: 201.1
1927 Female, age 91, both hemispheres 282.6
2010 Male, age 76, both hemispheres 206.0
2530 Female, age 94, left hemisphere 203.9
2531 Female, age 67, both hemispheres 179.0
2246 Female, age 85, both hemispheres 168.1
2528 Male, age 74, both hemispheres 167.1
Entorhinal gyrus
nTPM: 223.1
2613 Female, age 94, left hemisphere 303.3
2764 Male, age 80, right hemisphere 280.4
1938 Female, age 85, left hemisphere 236.8
1787 Male, age 76, left hemisphere 195.2
2686 Male, age 75, right hemisphere 187.7
2117 Female, age 91, right hemisphere 135.2
Hippocampus, CA1
nTPM: 216.7
2749 Male, age 80, left hemisphere 306.6
2045 Male, age 76, both hemispheres 207.9
2527 Male, age 74, both hemispheres 202.6
1873 Female, age 85, both hemispheres 197.4
2082 Female, age 91, right hemisphere 168.9
Hippocampus, CA2
nTPM: 200.0
1892 Male, age 76, both hemispheres 249.5
1963 Male, age 80, left hemisphere 243.5
2437 Female, age 94, left hemisphere 205.6
2249 Male, age 74, both hemispheres 174.3
1940 Female, age 85, left hemisphere 164.3
2113 Female, age 91, right hemisphere 163.1
Hippocampus, CA3
nTPM: 218.4
2620 Female, age 94, left hemisphere 261.2
2436 Male, age 74, both hemispheres 261.1
2137 Male, age 80, left hemisphere 216.0
1867 Male, age 76, both hemispheres 213.9
2861 Female, age 67, both hemispheres 196.7
1891 Female, age 85, both hemispheres 161.7
Parahippocampal cortex
nTPM: 222.1
1850 Male, age 80, both hemispheres 296.1
1990 Female, age 91, right hemisphere 244.0
1933 Female, age 85, both hemispheres 243.2
2532 Female, age 72, left hemisphere 226.6
2245 Female, age 91, both hemispheres 225.4
2693 Female, age 94, both hemispheres 222.9
2622 Female, age 67, right hemisphere 202.1
2018 Male, age 76, both hemispheres 199.2
2250 Female, age 67, right hemisphere 194.5
2692 Male, age 74, both hemispheres 167.0
Perirhinal gyrus
nTPM: 286.7
1847 Female, age 91, left hemisphere 407.3
1794 Male, age 80, right hemisphere 313.3
1841 Female, age 85, right hemisphere 274.7
2521 Female, age 94, right hemisphere 240.8
2848 Male, age 76, right hemisphere 197.5
Subiculum
nTPM: 165.3
1977 Female, age 85, both hemispheres 194.8
2619 Male, age 74, both hemispheres 188.7
1901 Male, age 80, both hemispheres 183.8
2438 Female, age 94, left hemisphere 167.0
2729 Female, age 91, right hemisphere 133.0
2042 Male, age 76, both hemispheres 124.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 173.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 173.2
Samples: 197

Max nTPM: 414.1
Min nTPM: 65.8
Std nTPM: 67.5
Median nTPM: 162.2
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 414.1
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 363.9
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 353.0
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 349.8
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 321.7
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 321.2
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 319.5
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 300.5
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 299.6
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 291.0
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 285.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 418.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 418.7
FF:10169-103B7 60 years, female 537.9
FF:10153-102I9 76 years, female 299.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 308.6
Pig sample Sample description nTPM
Subiculum
nTPM: 258.4
Samples: 4

Max nTPM: 318.9
Min nTPM: 234.6
Sample A Female 318.9
Sample B Female 234.6
Sample C Male 241.2
Sample D Male 238.8
Dorsal hippocampus
nTPM: 308.6
Samples: 4

Max nTPM: 424.8
Min nTPM: 232.0
Sample A Female 424.8
Sample B Female 312.2
Sample C Male 265.5
Sample D Male 232.0
Entorhinal cortex
nTPM: 259.5
Samples: 4

Max nTPM: 302.2
Min nTPM: 228.5
Sample A Female 302.2
Sample B Female 258.1
Sample C Male 249.1
Sample D Male 228.5
Ventral hippocampus
nTPM: 297.0
Samples: 4

Max nTPM: 359.9
Min nTPM: 188.4
Sample A Female 333.5
Sample B Female 188.4
Sample C Male 359.9
Sample D Male 306.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 370.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 340.7
Samples: 4

Max nTPM: 346.4
Min nTPM: 330.3
Sample A Male 346.4
Sample B Male 340.4
Sample C Female 330.3
Sample D Female 345.6
Hippocampal formation
nTPM: 370.9
Samples: 4

Max nTPM: 400.5
Min nTPM: 346.8
Sample A Male 385.1
Sample B Male 400.5
Sample C Female 346.8
Sample D Female 351.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 25.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 25.5
100144120 Antisense, RP_110407_02_H10, Mouse strain C57BL/6J (56 days, male) 25.5

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