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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
99.3
nTPM
Monaco:
218.4
nTPM
Schmiedel:
72.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
99.3
HPA sample
nTPM
gdT-cell nTPM: 80.5
Samples: 6
Max nTPM: 104.0
Min nTPM: 61.0
P10809_1007
61.0
P10809_1022
104.0
P10809_1041
78.9
P10809_1060
79.0
P10809_1077
89.6
P10809_1098
70.7
MAIT T-cell nTPM: 99.3
Samples: 6
Max nTPM: 116.0
Min nTPM: 77.9
P10809_1006
95.9
P10809_1024
106.5
P10809_1043
116.0
P10809_1062
88.0
P10809_1083
77.9
P10809_1097
111.6
Memory CD4 T-cell nTPM: 73.9
Samples: 6
Max nTPM: 92.0
Min nTPM: 52.1
P10809_1014
69.9
P10809_1026
92.0
P10809_1045
88.9
P10809_1064
67.4
P10809_1086
52.1
P10809_1113
73.2
Memory CD8 T-cell nTPM: 93.1
Samples: 5
Max nTPM: 111.1
Min nTPM: 77.5
P10809_1012
111.1
P10809_1027
106.5
P10809_1046
82.2
P10809_1065
88.3
P10809_1111
77.5
Naive CD4 T-cell nTPM: 61.9
Samples: 6
Max nTPM: 64.3
Min nTPM: 52.7
P10809_1015
64.3
P10809_1030
63.3
P10809_1049
52.7
P10809_1068
64.1
P10809_1085
63.4
P10809_1112
63.7
Naive CD8 T-cell nTPM: 73.0
Samples: 6
Max nTPM: 84.9
Min nTPM: 60.2
P10809_1016
84.6
P10809_1031
84.9
P10809_1050
63.8
P10809_1069
71.1
P10809_1087
73.5
P10809_1110
60.2
T-reg nTPM: 83.6
Samples: 6
Max nTPM: 99.7
Min nTPM: 65.8
P10809_1018
99.7
P10809_1037
65.8
P10809_1056
73.1
P10809_1075
86.2
P10809_1094
90.1
P10809_1106
86.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
218.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 168.7
Samples: 4
Max nTPM: 199.6
Min nTPM: 146.8
RHH5202_R3573
148.8
RHH5230_R3602
199.6
RHH5259_R3631
146.8
RHH5288_R3660
179.6
Effector memory CD8 T-cell nTPM: 217.5
Samples: 4
Max nTPM: 284.7
Min nTPM: 183.2
RHH5203_R3574
284.7
RHH5231_R3603
183.2
RHH5260_R3632
202.3
RHH5289_R3661
199.7
MAIT T-cell nTPM: 218.5
Samples: 4
Max nTPM: 256.5
Min nTPM: 163.4
RHH5233_R3605
163.4
RHH5205_R3576
256.5
RHH5262_R3634
232.2
RHH5297_R3663
221.7
Memory CD4 T-cell TFH nTPM: 154.8
Samples: 4
Max nTPM: 193.4
Min nTPM: 103.8
RHH5300_R3666
181.2
RHH5236_R3608
103.8
RHH5265_R3637
140.8
RHH5208_R3579
193.4
Memory CD4 T-cell Th1 nTPM: 137.0
Samples: 4
Max nTPM: 170.7
Min nTPM: 103.3
RHH5210_R3581
122.0
RHH5302_R3668
170.7
RHH5238_R3610
103.3
RHH5267_R3639
151.8
Memory CD4 T-cell Th1/Th17 nTPM: 159.4
Samples: 4
Max nTPM: 189.8
Min nTPM: 136.3
RHH5303_R3669
189.8
RHH5211_R3582
157.3
RHH5239_R3611
136.3
RHH5268_R3640
154.1
Memory CD4 T-cell Th17 nTPM: 167.3
Samples: 4
Max nTPM: 198.4
Min nTPM: 124.2
RHH5304_R3670
198.4
RHH5212_R3583
124.2
RHH5240_R3612
152.8
RHH5269_R3641
193.8
Memory CD4 T-cell Th2 nTPM: 177.4
Samples: 4
Max nTPM: 195.6
Min nTPM: 151.8
RHH5305_R3671
191.4
RHH5213_R3584
195.6
RHH5241_R3613
151.8
RHH5270_R3642
170.8
Naive CD4 T-cell nTPM: 133.1
Samples: 4
Max nTPM: 153.6
Min nTPM: 101.6
RHH5306_R3672
101.6
RHH5214_R3585
153.6
RHH5242_R3614
152.2
RHH5271_R3643
125.0
Naive CD8 T-cell nTPM: 118.7
Samples: 4
Max nTPM: 153.6
Min nTPM: 78.3
RHH5201_R3572
153.6
RHH5229_R3601
78.3
RHH5258_R3630
115.0
RHH5287_R3659
127.9
Non-Vd2 gdTCR nTPM: 205.7
Samples: 4
Max nTPM: 243.2
Min nTPM: 181.0
RHH5235_R3607
202.1
RHH5264_R3636
181.0
RHH5207_R3578
196.6
RHH5299_R3665
243.2
T-reg nTPM: 136.9
Samples: 4
Max nTPM: 165.4
Min nTPM: 118.8
RHH5301_R3667
165.4
RHH5237_R3609
118.8
RHH5266_R3638
122.3
RHH5209_R3580
141.2
Terminal effector memory CD4 T-cell nTPM: 193.4
Samples: 2
Max nTPM: 196.7
Min nTPM: 190.1
RHH5243_R3615
190.1
RHH5272_R3644
196.7
Terminal effector memory CD8 T-cell nTPM: 199.8
Samples: 4
Max nTPM: 219.9
Min nTPM: 172.4
RHH5232_R3604
207.1
RHH5204_R3575
199.8
RHH5261_R3633
172.4
RHH5296_R3662
219.9
Vd2 gdTCR nTPM: 162.1
Samples: 4
Max nTPM: 217.7
Min nTPM: 133.7
RHH5234_R3606
217.7
RHH5206_R3577
160.1
RHH5263_R3635
133.7
RHH5298_R3664
136.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
