HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:266.3 nTPM
HPA Brain:529.3 nTPM
GTEx:266.3 nTPM
FANTOM5:340.6 Scaled Tags Per Million
Pig:747.1 nTPM
Mouse:534.9 nTPM
Allen mouse:9.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA012800Antibody CAB020812
Glial cells Not detectedLow
Neuronal cells MediumHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 529.3
Sample id Sample description nTPM
Hippocampus
nTPM: 422.3
2621 Female, age 67, right hemisphere 519.0
1898 Male, age 80, left hemisphere 514.6
1855 Male, age 76, left hemisphere 487.5
2148 Female, age 91, left hemisphere 354.7
1911 Female, age 85, right hemisphere 339.3
2529 Female, age 94, left hemisphere 318.8
Dentate gyrus
nTPM: 448.6
1927 Female, age 91, both hemispheres 576.1
2530 Female, age 94, left hemisphere 575.5
2010 Male, age 76, both hemispheres 492.0
2531 Female, age 67, both hemispheres 386.4
2246 Female, age 85, both hemispheres 381.1
2528 Male, age 74, both hemispheres 280.6
Entorhinal gyrus
nTPM: 423.1
2613 Female, age 94, left hemisphere 598.3
2764 Male, age 80, right hemisphere 463.6
1938 Female, age 85, left hemisphere 454.5
1787 Male, age 76, left hemisphere 446.2
2686 Male, age 75, right hemisphere 309.4
2117 Female, age 91, right hemisphere 266.4
Hippocampus, CA1
nTPM: 508.3
2749 Male, age 80, left hemisphere 804.5
2045 Male, age 76, both hemispheres 557.4
1873 Female, age 85, both hemispheres 428.4
2082 Female, age 91, right hemisphere 405.7
2527 Male, age 74, both hemispheres 345.6
Hippocampus, CA2
nTPM: 411.9
1892 Male, age 76, both hemispheres 577.1
1963 Male, age 80, left hemisphere 517.1
2437 Female, age 94, left hemisphere 424.2
1940 Female, age 85, left hemisphere 364.0
2113 Female, age 91, right hemisphere 321.6
2249 Male, age 74, both hemispheres 267.3
Hippocampus, CA3
nTPM: 461.2
2137 Male, age 80, left hemisphere 610.0
2620 Female, age 94, left hemisphere 598.5
1867 Male, age 76, both hemispheres 493.5
2861 Female, age 67, both hemispheres 445.2
2436 Male, age 74, both hemispheres 317.5
1891 Female, age 85, both hemispheres 302.4
Parahippocampal cortex
nTPM: 387.4
2245 Female, age 91, both hemispheres 477.0
1850 Male, age 80, both hemispheres 439.1
1933 Female, age 85, both hemispheres 408.5
2250 Female, age 67, right hemisphere 402.1
2018 Male, age 76, both hemispheres 400.1
1990 Female, age 91, right hemisphere 393.7
2693 Female, age 94, both hemispheres 388.0
2622 Female, age 67, right hemisphere 344.5
2532 Female, age 72, left hemisphere 328.5
2692 Male, age 74, both hemispheres 292.3
Perirhinal gyrus
nTPM: 529.3
1847 Female, age 91, left hemisphere 646.7
2521 Female, age 94, right hemisphere 602.2
1794 Male, age 80, right hemisphere 556.8
1841 Female, age 85, right hemisphere 440.9
2848 Male, age 76, right hemisphere 400.0
Subiculum
nTPM: 336.9
1901 Male, age 80, both hemispheres 424.6
1977 Female, age 85, both hemispheres 386.1
2042 Male, age 76, both hemispheres 346.4
2438 Female, age 94, left hemisphere 317.9
2619 Male, age 74, both hemispheres 290.5
2729 Female, age 91, right hemisphere 255.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 266.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 266.3
Samples: 197

Max nTPM: 666.8
Min nTPM: 72.3
Std nTPM: 128.7
Median nTPM: 244.8
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 666.8
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 605.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 597.2
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 572.9
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 568.0
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 562.6
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 545.1
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 535.1
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 532.1
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 530.6
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 514.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 340.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 340.6
FF:10169-103B7 60 years, female 453.8
FF:10153-102I9 76 years, female 227.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 747.1
Pig sample Sample description nTPM
Subiculum
nTPM: 598.6
Samples: 4

Max nTPM: 748.6
Min nTPM: 486.4
Sample A Female 748.6
Sample B Female 498.0
Sample C Male 661.3
Sample D Male 486.4
Dorsal hippocampus
nTPM: 678.4
Samples: 4

Max nTPM: 866.6
Min nTPM: 457.5
Sample A Female 866.6
Sample B Female 795.4
Sample C Male 594.1
Sample D Male 457.5
Entorhinal cortex
nTPM: 620.1
Samples: 4

Max nTPM: 741.3
Min nTPM: 545.3
Sample A Female 741.3
Sample B Female 545.3
Sample C Male 647.1
Sample D Male 546.5
Ventral hippocampus
nTPM: 747.1
Samples: 4

Max nTPM: 943.1
Min nTPM: 425.0
Sample A Female 756.8
Sample B Female 425.0
Sample C Male 943.1
Sample D Male 863.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 534.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 534.9
Samples: 4

Max nTPM: 592.0
Min nTPM: 472.5
Sample A Male 518.2
Sample B Male 556.8
Sample C Female 472.5
Sample D Female 592.0
Hippocampal formation
nTPM: 416.6
Samples: 4

Max nTPM: 446.9
Min nTPM: 391.0
Sample A Male 446.9
Sample B Male 414.8
Sample C Female 391.0
Sample D Female 413.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.4
77464848 Antisense, RP_070129_02_B12, Mouse strain C57BL/6J (56 days, male) 22.3
808 Antisense, RP_Baylor_102968, Mouse strain C57BL/6J (56 days, male) 5.9
809 Antisense, RP_Baylor_102968, Mouse strain C57BL/6J (56 days, male) 4.3
810 Sense, RPS_Baylor_37025, Mouse strain C57BL/6J (56 days, male) 0.0

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