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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
15.2
nTPM
Monaco:
14.8
nTPM
Schmiedel:
18.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
15.2
HPA sample
nTPM
gdT-cell nTPM: 15.2
Samples: 6
Max nTPM: 25.4
Min nTPM: 8.2
P10809_1007
8.2
P10809_1022
13.4
P10809_1041
25.4
P10809_1060
17.0
P10809_1077
8.4
P10809_1098
18.9
MAIT T-cell nTPM: 10.8
Samples: 6
Max nTPM: 16.6
Min nTPM: 6.3
P10809_1006
6.3
P10809_1024
11.7
P10809_1043
8.7
P10809_1062
11.6
P10809_1083
9.9
P10809_1097
16.6
Memory CD4 T-cell nTPM: 10.9
Samples: 6
Max nTPM: 14.5
Min nTPM: 6.3
P10809_1014
6.3
P10809_1026
9.7
P10809_1045
11.4
P10809_1064
14.5
P10809_1086
9.7
P10809_1113
13.6
Memory CD8 T-cell nTPM: 14.1
Samples: 5
Max nTPM: 18.8
Min nTPM: 9.4
P10809_1012
9.4
P10809_1027
15.7
P10809_1046
14.6
P10809_1065
11.8
P10809_1111
18.8
Naive CD4 T-cell nTPM: 9.3
Samples: 6
Max nTPM: 15.1
Min nTPM: 4.0
P10809_1015
4.0
P10809_1030
6.3
P10809_1049
9.1
P10809_1068
10.8
P10809_1085
10.5
P10809_1112
15.1
Naive CD8 T-cell nTPM: 10.7
Samples: 6
Max nTPM: 15.8
Min nTPM: 4.5
P10809_1016
4.5
P10809_1031
11.1
P10809_1050
8.6
P10809_1069
14.6
P10809_1087
9.3
P10809_1110
15.8
T-reg nTPM: 13.0
Samples: 6
Max nTPM: 15.4
Min nTPM: 10.0
P10809_1018
10.0
P10809_1037
15.4
P10809_1056
11.7
P10809_1075
15.1
P10809_1094
15.3
P10809_1106
10.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
14.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 9.1
Samples: 4
Max nTPM: 12.9
Min nTPM: 5.9
RHH5202_R3573
11.0
RHH5230_R3602
12.9
RHH5259_R3631
6.5
RHH5288_R3660
5.9
Effector memory CD8 T-cell nTPM: 14.3
Samples: 4
Max nTPM: 16.9
Min nTPM: 11.2
RHH5203_R3574
16.9
RHH5231_R3603
16.5
RHH5260_R3632
11.2
RHH5289_R3661
12.7
MAIT T-cell nTPM: 9.7
Samples: 4
Max nTPM: 12.1
Min nTPM: 6.3
RHH5233_R3605
10.5
RHH5205_R3576
10.0
RHH5262_R3634
6.3
RHH5297_R3663
12.1
Memory CD4 T-cell TFH nTPM: 9.4
Samples: 4
Max nTPM: 13.6
Min nTPM: 5.1
RHH5300_R3666
9.1
RHH5236_R3608
13.6
RHH5265_R3637
9.6
RHH5208_R3579
5.1
Memory CD4 T-cell Th1 nTPM: 10.5
Samples: 4
Max nTPM: 14.1
Min nTPM: 8.1
RHH5210_R3581
9.3
RHH5302_R3668
14.1
RHH5238_R3610
8.1
RHH5267_R3639
10.4
Memory CD4 T-cell Th1/Th17 nTPM: 9.2
Samples: 4
Max nTPM: 11.0
Min nTPM: 7.3
RHH5303_R3669
10.0
RHH5211_R3582
11.0
RHH5239_R3611
7.3
RHH5268_R3640
8.4
Memory CD4 T-cell Th17 nTPM: 12.3
Samples: 4
Max nTPM: 16.0
Min nTPM: 8.4
RHH5304_R3670
13.7
RHH5212_R3583
16.0
RHH5240_R3612
8.4
RHH5269_R3641
11.2
Memory CD4 T-cell Th2 nTPM: 10.8
Samples: 4
Max nTPM: 14.0
Min nTPM: 7.9
RHH5305_R3671
7.9
RHH5213_R3584
14.0
RHH5241_R3613
12.2
RHH5270_R3642
9.0
Naive CD4 T-cell nTPM: 9.3
Samples: 4
Max nTPM: 15.8
Min nTPM: 3.9
RHH5306_R3672
7.8
RHH5214_R3585
15.8
RHH5242_R3614
9.7
RHH5271_R3643
3.9
Naive CD8 T-cell nTPM: 5.6
Samples: 4
Max nTPM: 7.0
Min nTPM: 4.1
RHH5201_R3572
4.1
RHH5229_R3601
5.5
RHH5258_R3630
5.8
RHH5287_R3659
7.0
Non-Vd2 gdTCR nTPM: 14.9
Samples: 4
Max nTPM: 16.4
Min nTPM: 13.7
RHH5235_R3607
13.7
RHH5264_R3636
16.4
RHH5207_R3578
14.5
RHH5299_R3665
14.8
T-reg nTPM: 10.6
Samples: 4
Max nTPM: 13.7
Min nTPM: 8.0
RHH5301_R3667
8.0
RHH5237_R3609
13.7
RHH5266_R3638
12.5
RHH5209_R3580
8.2
Terminal effector memory CD4 T-cell nTPM: 8.1
Samples: 2
Max nTPM: 9.8
Min nTPM: 6.3
RHH5243_R3615
9.8
RHH5272_R3644
6.3
Terminal effector memory CD8 T-cell nTPM: 13.7
Samples: 4
Max nTPM: 16.2
Min nTPM: 10.3
RHH5232_R3604
16.2
RHH5204_R3575
15.0
RHH5261_R3633
13.2
RHH5296_R3662
10.3
Vd2 gdTCR nTPM: 12.8
Samples: 4
Max nTPM: 17.7
Min nTPM: 9.2
RHH5234_R3606
9.2
RHH5206_R3577
17.7
RHH5263_R3635
14.5
RHH5298_R3664
9.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
