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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
221.5
nTPM
FANTOM5:
212.8
Scaled Tags Per Million
Pig:
141.3
nTPM
Allen mouse:
3.1
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
221.5
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 205.0
2301
Female, age 85, both hemispheres
239.4
2188
Female, age 91, both hemispheres
230.4
2090
Male, age 80, both hemispheres
211.3
1984
Male, age 76, both hemispheres
139.1
Dorsal cochlear nucleus nTPM: 174.1
2187
Female, age 91, both hemispheres
210.0
2802
Male, age 74, right hemisphere
182.0
2058
Male, age 76, both hemispheres
171.2
2378
Male, age 80, both hemispheres
158.2
2370
Male, age 61, both hemispheres
149.1
Dorsal tegmental nucleus nTPM: 181.7
2326
Male, age 74, both hemispheres
203.1
2083
Male, age 80, both hemispheres
199.7
1936
Male, age 76, left hemisphere
163.3
2358
Male, age 61, both hemispheres
160.7
Dorsolateral tegmental area nTPM: 182.8
2751
Female, age 85, both hemispheres
210.1
2654
Male, age 80, both hemispheres
203.1
2337
Male, age 61, both hemispheres
189.1
2360
Male, age 74, both hemispheres
164.0
2141
Male, age 76, both hemispheres
147.6
Kolliker-Fuse nucleus nTPM: 214.6
2793
Female, age 91, left hemisphere
248.7
2163
Male, age 80, both hemispheres
220.9
2315
Male, age 76, right hemisphere
174.4
Lateral lemniscal nuclei nTPM: 189.4
2169
Male, age 76, both hemispheres
205.4
2320
Female, age 91, left hemisphere
189.9
2036
Male, age 80, both hemispheres
189.7
2746
Female, age 85, left hemisphere
188.7
2453
Male, age 74, right hemisphere
173.4
Lateral parabrachial nucleus nTPM: 216.2
2792
Male, age 76, both hemispheres
264.3
2013
Male, age 80, both hemispheres
209.2
2790
Male, age 61, both hemispheres
206.8
2139
Female, age 85, right hemisphere
184.4
Lateral vestibular nucleus nTPM: 206.2
2311
Male, age 80, both hemispheres
211.4
2184
Male, age 76, both hemispheres
201.0
Locus coeruleus nTPM: 195.3
2014
Male, age 55, unknown
220.2
2123
Female, age 91, both hemispheres
218.1
1980
Male, age 76, both hemispheres
200.7
2720
Male, age 74, both hemispheres
194.8
2317
Female, age 72, unknown
188.9
2162
Male, age 80, both hemispheres
182.1
2788
Male, age 74, unknown
162.2
Medial parabrachial nucleus nTPM: 202.1
2170
Female, age 91, both hemispheres
241.5
2854
Male, age 80, both hemispheres
211.9
2463
Female, age 85, right hemisphere
190.3
2156
Male, age 61, both hemispheres
188.0
2786
Male, age 76, both hemispheres
178.9
Medial periolivary nuclei nTPM: 197.5
2791
Male, age 74, right hemisphere
233.9
2063
Male, age 76, both hemispheres
199.0
2171
Female, age 85, both hemispheres
194.7
2081
Male, age 80, both hemispheres
182.2
2458
Female, age 91, both hemispheres
177.4
Motor facial nucleus nTPM: 209.6
2365
Male, age 74, right hemisphere
262.1
2697
Female, age 85, both hemispheres
218.5
2126
Male, age 61, both hemispheres
208.2
2062
Male, age 76, both hemispheres
205.8
2327
Male, age 80, both hemispheres
182.2
2795
Female, age 91, both hemispheres
180.5
Motor trigeminal nucleus nTPM: 183.4
2560
Male, age 74, both hemispheres
210.9
2321
Female, age 91, both hemispheres
185.9
2079
Male, age 80, both hemispheres
181.8
2309
Male, age 76, both hemispheres
169.4
2335
Male, age 61, both hemispheres
168.9
Nuclei of the trapezoid body nTPM: 194.3
1983
Male, age 76, both hemispheres
230.2
2159
Male, age 61, both hemispheres
208.1
2166
Male, age 80, both hemispheres
185.0
2735
Female, age 85, both hemispheres
177.0
2368
Female, age 91, both hemispheres
170.9
Nucleus raphe magnus nTPM: 199.0
2455
Male, age 74, both hemispheres
227.8
2051
Male, age 76, both hemispheres
213.7
2160
Male, age 61, both hemispheres
212.3
2328
Male, age 80, both hemispheres
190.9
2172
Female, age 85, both hemispheres
179.2
2459
Female, age 91, both hemispheres
170.3
Paramedian reticular nucleus nTPM: 200.8
2050
Female, age 85, both hemispheres
222.9
2057
Male, age 80, both hemispheres
207.3
2313
Male, age 61, both hemispheres
196.9
2052
Male, age 76, both hemispheres
176.3
Pedunculopontine tegmental nucleus nTPM: 184.0
2334
Male, age 80, both hemispheres
202.6
2338
Male, age 61, both hemispheres
182.1
1921
Female, age 85, both hemispheres
167.4
Pontine nuclei nTPM: 220.2
2454
Male, age 74, left hemisphere
270.9
1863
Male, age 55, unknown
242.5
2319
Female, age 91, both hemispheres
222.7
2109
Female, age 72, unknown
220.0
1968
Male, age 76, left hemisphere
214.4
2727
Male, age 61, right hemisphere
210.1
2787
Female, age 85, both hemispheres
204.5
2115
Male, age 80, left hemisphere
176.4
Pontine raphe nucleus nTPM: 191.7
2853
Male, age 76, midline
197.0
2122
Female, age 85, midline
186.4
Posteroventral cochlear nucleus nTPM: 194.4
2135
Female, age 91, both hemispheres
238.7
2341
Male, age 80, both hemispheres
210.6
2070
Male, age 76, both hemispheres
187.0
2752
Female, age 85, both hemispheres
176.0
2371
Male, age 61, both hemispheres
159.8
Principal sensory trigeminal nucleus nTPM: 200.1
2367
Female, age 91, left hemisphere
225.2
2324
Male, age 76, both hemispheres
200.7
2158
Male, age 61, both hemispheres
189.5
2008
Male, age 80, left hemisphere
184.8
Reticular pontine nucleus, caudal nTPM: 205.8
2559
Male, age 74, both hemispheres
250.2
2092
Male, age 76, both hemispheres
211.6
2457
Female, age 91, both hemispheres
192.7
2332
Male, age 80, right hemisphere
168.7
Reticular pontine nucleus, oral nTPM: 221.5
2361
Male, age 74, both hemispheres
280.4
1939
Male, age 80, both hemispheres
220.1
2366
Female, age 91, both hemispheres
217.3
2167
Male, age 76, both hemispheres
195.9
2012
Female, age 85, both hemispheres
193.8
Reticulotegmental nucleus nTPM: 178.2
2322
Female, age 91, both hemispheres
186.6
2333
Male, age 80, both hemispheres
179.5
2325
Male, age 76, both hemispheres
175.7
2452
Male, age 74, both hemispheres
170.9
Spinal trigeminal nucleus, oral nTPM: 179.5
2164
Male, age 80, both hemispheres
198.7
2737
Female, age 85, both hemispheres
172.1
1978
Male, age 76, both hemispheres
167.8
Subcoeruleus area nTPM: 183.0
2369
Female, age 85, left hemisphere
213.6
1958
Male, age 80, both hemispheres
199.2
2323
Female, age 91, left hemisphere
182.6
2089
Male, age 76, left hemisphere
180.5
2451
Male, age 74, both hemispheres
138.9
Superior olive nTPM: 213.6
2364
Male, age 74, right hemisphere
262.4
2020
Male, age 76, both hemispheres
224.4
1875
Female, age 85, both hemispheres
199.6
2329
Male, age 80, right hemisphere
196.2
2561
Female, age 91, both hemispheres
185.6
Ventral periolivary nuclei nTPM: 194.7
2023
Male, age 76, both hemispheres
222.0
2165
Male, age 80, both hemispheres
204.1
2130
Female, age 85, both hemispheres
195.7
2794
Female, age 91, left hemisphere
157.0
Ventrolateral tegmental area, A5 NE cell group nTPM: 192.6
2840
Female, age 85, both hemispheres
217.6
1959
Male, age 76, both hemispheres
212.1
2359
Male, age 61, both hemispheres
199.7
2449
Male, age 74, both hemispheres
192.1
2161
Male, age 80, both hemispheres
171.8
2456
Female, age 91, both hemispheres
162.1
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
141.3
Pig sample
Sample description
nTPM
Pons nTPM: 141.3
Samples: 4
Max nTPM: 160.9
Min nTPM: 120.5
Sample A
Female
127.5
Sample B
Female
120.5
Sample C
Male
160.9
Sample D
Male
156.4
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
