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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
387.9
nTPM
Monaco:
202.6
nTPM
Schmiedel:
91.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
387.9
HPA sample
nTPM
gdT-cell nTPM: 286.9
Samples: 6
Max nTPM: 457.7
Min nTPM: 183.7
P10809_1007
183.7
P10809_1022
357.4
P10809_1041
457.7
P10809_1060
220.2
P10809_1077
233.2
P10809_1098
269.3
MAIT T-cell nTPM: 191.0
Samples: 6
Max nTPM: 222.1
Min nTPM: 124.2
P10809_1006
124.2
P10809_1024
212.3
P10809_1043
208.6
P10809_1062
186.1
P10809_1083
192.4
P10809_1097
222.1
Memory CD4 T-cell nTPM: 261.3
Samples: 6
Max nTPM: 321.8
Min nTPM: 170.5
P10809_1014
170.5
P10809_1026
321.8
P10809_1045
282.7
P10809_1064
262.3
P10809_1086
257.8
P10809_1113
272.9
Memory CD8 T-cell nTPM: 249.5
Samples: 5
Max nTPM: 310.0
Min nTPM: 163.0
P10809_1012
163.0
P10809_1027
295.5
P10809_1046
310.0
P10809_1065
251.8
P10809_1111
227.3
Naive CD4 T-cell nTPM: 156.5
Samples: 6
Max nTPM: 250.0
Min nTPM: 81.6
P10809_1015
81.6
P10809_1030
161.9
P10809_1049
250.0
P10809_1068
145.3
P10809_1085
149.9
P10809_1112
150.4
Naive CD8 T-cell nTPM: 196.1
Samples: 6
Max nTPM: 243.1
Min nTPM: 104.2
P10809_1016
104.2
P10809_1031
243.1
P10809_1050
216.5
P10809_1069
223.4
P10809_1087
225.9
P10809_1110
163.5
T-reg nTPM: 387.9
Samples: 6
Max nTPM: 532.8
Min nTPM: 226.2
P10809_1018
226.2
P10809_1037
393.2
P10809_1056
532.8
P10809_1075
354.3
P10809_1094
386.4
P10809_1106
434.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
202.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 121.9
Samples: 4
Max nTPM: 194.7
Min nTPM: 76.2
RHH5202_R3573
133.5
RHH5230_R3602
76.2
RHH5259_R3631
83.1
RHH5288_R3660
194.7
Effector memory CD8 T-cell nTPM: 129.8
Samples: 4
Max nTPM: 174.1
Min nTPM: 90.9
RHH5203_R3574
124.6
RHH5231_R3603
174.1
RHH5260_R3632
129.7
RHH5289_R3661
90.9
MAIT T-cell nTPM: 134.1
Samples: 4
Max nTPM: 201.9
Min nTPM: 88.7
RHH5233_R3605
119.2
RHH5205_R3576
88.7
RHH5262_R3634
126.5
RHH5297_R3663
201.9
Memory CD4 T-cell TFH nTPM: 171.6
Samples: 4
Max nTPM: 258.5
Min nTPM: 100.7
RHH5300_R3666
201.3
RHH5236_R3608
258.5
RHH5265_R3637
125.9
RHH5208_R3579
100.7
Memory CD4 T-cell Th1 nTPM: 151.1
Samples: 4
Max nTPM: 230.1
Min nTPM: 124.0
RHH5210_R3581
125.9
RHH5302_R3668
230.1
RHH5238_R3610
124.4
RHH5267_R3639
124.0
Memory CD4 T-cell Th1/Th17 nTPM: 136.1
Samples: 4
Max nTPM: 174.3
Min nTPM: 86.6
RHH5303_R3669
174.3
RHH5211_R3582
161.5
RHH5239_R3611
86.6
RHH5268_R3640
121.8
Memory CD4 T-cell Th17 nTPM: 123.2
Samples: 4
Max nTPM: 173.7
Min nTPM: 82.7
RHH5304_R3670
131.4
RHH5212_R3583
173.7
RHH5240_R3612
104.9
RHH5269_R3641
82.7
Memory CD4 T-cell Th2 nTPM: 141.8
Samples: 4
Max nTPM: 184.3
Min nTPM: 112.3
RHH5305_R3671
142.1
RHH5213_R3584
128.4
RHH5241_R3613
184.3
RHH5270_R3642
112.3
Naive CD4 T-cell nTPM: 89.9
Samples: 4
Max nTPM: 115.5
Min nTPM: 77.9
RHH5306_R3672
87.0
RHH5214_R3585
115.5
RHH5242_R3614
79.0
RHH5271_R3643
77.9
Naive CD8 T-cell nTPM: 80.4
Samples: 4
Max nTPM: 127.0
Min nTPM: 37.2
RHH5201_R3572
37.2
RHH5229_R3601
59.0
RHH5258_R3630
127.0
RHH5287_R3659
98.3
Non-Vd2 gdTCR nTPM: 187.0
Samples: 4
Max nTPM: 275.2
Min nTPM: 138.1
RHH5235_R3607
138.1
RHH5264_R3636
195.7
RHH5207_R3578
138.8
RHH5299_R3665
275.2
T-reg nTPM: 152.9
Samples: 4
Max nTPM: 210.5
Min nTPM: 97.4
RHH5301_R3667
199.3
RHH5237_R3609
210.5
RHH5266_R3638
97.4
RHH5209_R3580
104.2
Terminal effector memory CD4 T-cell nTPM: 141.3
Samples: 2
Max nTPM: 160.4
Min nTPM: 122.2
RHH5243_R3615
122.2
RHH5272_R3644
160.4
Terminal effector memory CD8 T-cell nTPM: 202.6
Samples: 4
Max nTPM: 300.4
Min nTPM: 139.1
RHH5232_R3604
168.6
RHH5204_R3575
300.4
RHH5261_R3633
139.1
RHH5296_R3662
202.1
Vd2 gdTCR nTPM: 166.5
Samples: 4
Max nTPM: 250.4
Min nTPM: 99.8
RHH5234_R3606
128.5
RHH5206_R3577
250.4
RHH5263_R3635
99.8
RHH5298_R3664
187.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
