HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:47.8 nTPM
HPA Brain:64.1 nTPM
GTEx:47.8 nTPM
FANTOM5:94.8 Scaled Tags Per Million
Pig:20.4 nTPM
Mouse:42.0 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA045156
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 64.1
Sample id Sample description nTPM
Hippocampus
nTPM: 58.9
1898 Male, age 80, left hemisphere 74.0
2529 Female, age 94, left hemisphere 64.6
2621 Female, age 67, right hemisphere 58.1
1911 Female, age 85, right hemisphere 55.2
2148 Female, age 91, left hemisphere 51.8
1855 Male, age 76, left hemisphere 49.9
Dentate gyrus
nTPM: 56.6
2530 Female, age 94, left hemisphere 87.0
1927 Female, age 91, both hemispheres 57.0
2246 Female, age 85, both hemispheres 52.9
2010 Male, age 76, both hemispheres 49.8
2531 Female, age 67, both hemispheres 48.6
2528 Male, age 74, both hemispheres 44.1
Entorhinal gyrus
nTPM: 64.1
2764 Male, age 80, right hemisphere 83.9
1938 Female, age 85, left hemisphere 69.8
1787 Male, age 76, left hemisphere 68.0
2117 Female, age 91, right hemisphere 65.8
2686 Male, age 75, right hemisphere 55.1
2613 Female, age 94, left hemisphere 41.7
Hippocampus, CA1
nTPM: 55.7
1873 Female, age 85, both hemispheres 62.9
2749 Male, age 80, left hemisphere 58.8
2527 Male, age 74, both hemispheres 56.6
2045 Male, age 76, both hemispheres 51.8
2082 Female, age 91, right hemisphere 48.3
Hippocampus, CA2
nTPM: 56.8
1892 Male, age 76, both hemispheres 66.6
1963 Male, age 80, left hemisphere 65.8
2437 Female, age 94, left hemisphere 61.9
1940 Female, age 85, left hemisphere 56.6
2249 Male, age 74, both hemispheres 51.2
2113 Female, age 91, right hemisphere 38.6
Hippocampus, CA3
nTPM: 55.8
2137 Male, age 80, left hemisphere 60.4
2620 Female, age 94, left hemisphere 58.9
1891 Female, age 85, both hemispheres 57.8
1867 Male, age 76, both hemispheres 55.0
2436 Male, age 74, both hemispheres 52.0
2861 Female, age 67, both hemispheres 50.7
Parahippocampal cortex
nTPM: 54.7
1933 Female, age 85, both hemispheres 71.0
1850 Male, age 80, both hemispheres 65.1
2532 Female, age 72, left hemisphere 58.8
1990 Female, age 91, right hemisphere 57.6
2245 Female, age 91, both hemispheres 56.6
2692 Male, age 74, both hemispheres 50.3
2018 Male, age 76, both hemispheres 50.1
2250 Female, age 67, right hemisphere 48.0
2693 Female, age 94, both hemispheres 46.0
2622 Female, age 67, right hemisphere 43.7
Perirhinal gyrus
nTPM: 61.3
1794 Male, age 80, right hemisphere 72.8
1847 Female, age 91, left hemisphere 66.4
1841 Female, age 85, right hemisphere 63.5
2848 Male, age 76, right hemisphere 61.5
2521 Female, age 94, right hemisphere 42.2
Subiculum
nTPM: 60.0
1901 Male, age 80, both hemispheres 72.8
1977 Female, age 85, both hemispheres 66.4
2042 Male, age 76, both hemispheres 62.8
2619 Male, age 74, both hemispheres 57.1
2438 Female, age 94, left hemisphere 54.9
2729 Female, age 91, right hemisphere 46.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 47.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 47.8
Samples: 197

Max nTPM: 112.8
Min nTPM: 9.7
Std nTPM: 15.6
Median nTPM: 46.2
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 112.8
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 102.6
GTEX-1B933-0011-R1b-SM-9QEGW 50-59 years, female 89.1
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 86.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 82.4
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 79.9
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 78.1
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 78.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 77.9
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 77.3
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 74.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 94.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 94.8
FF:10169-103B7 60 years, female 103.8
FF:10153-102I9 76 years, female 85.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 20.4
Pig sample Sample description nTPM
Subiculum
nTPM: 18.2
Samples: 4

Max nTPM: 28.5
Min nTPM: 13.7
Sample A Female 28.5
Sample B Female 13.8
Sample C Male 16.6
Sample D Male 13.7
Dorsal hippocampus
nTPM: 20.4
Samples: 4

Max nTPM: 27.7
Min nTPM: 14.1
Sample A Female 27.7
Sample B Female 18.1
Sample C Male 21.7
Sample D Male 14.1
Entorhinal cortex
nTPM: 17.8
Samples: 4

Max nTPM: 19.8
Min nTPM: 13.4
Sample A Female 19.4
Sample B Female 18.6
Sample C Male 19.8
Sample D Male 13.4
Ventral hippocampus
nTPM: 18.4
Samples: 4

Max nTPM: 23.6
Min nTPM: 14.3
Sample A Female 19.7
Sample B Female 14.3
Sample C Male 23.6
Sample D Male 15.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 42.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 42.0
Samples: 4

Max nTPM: 47.7
Min nTPM: 36.5
Sample A Male 39.3
Sample B Male 44.6
Sample C Female 47.7
Sample D Female 36.5
Hippocampal formation
nTPM: 41.3
Samples: 4

Max nTPM: 48.0
Min nTPM: 37.9
Sample A Male 41.4
Sample B Male 37.9
Sample C Female 38.0
Sample D Female 48.0

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