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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
56.9
nTPM
HPA Brain:
70.5
nTPM
GTEx:
56.9
nTPM
FANTOM5:
111.1
Scaled Tags Per Million
Pig:
31.9
nTPM
Mouse:
29.6
nTPM
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
70.5
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 64.6
1870
Female, age 42, unknown
73.4
2586
Male, age 75, left hemisphere
73.4
1833
Male, age 53, unknown
69.0
2411
Female, age 72, unknown
65.0
2019
Male, age 18, unknown
64.6
1827
Male, age 72, unknown
62.7
2219
Male, age 76, both hemispheres
61.2
1830
Male, age 51, unknown
60.6
2666
Male, age 74, left hemisphere
59.5
2828
Female, age 72, unknown
56.4
Dorsal raphe nucleus nTPM: 63.0
2298
Female, age 72, unknown
78.5
2750
Male, age 76, both hemispheres
66.3
2047
Male, age 72, unknown
59.4
2016
Female, age 72, unknown
59.2
1828
Male, age 53, unknown
51.7
Inferior colliculus nTPM: 61.5
2097
Female, age 72, unknown
66.9
2849
Male, age 72, unknown
63.9
1848
Female, age 42, unknown
63.6
1890
Male, age 53, unknown
51.4
Median raphe nucleus nTPM: 66.6
2220
Male, age 76, midline
66.6
Periaquaductal grey, anterior nTPM: 64.9
2502
Female, age 75, unknown
71.7
1947
Male, age 18, unknown
61.6
1795
Male, age 51, unknown
61.4
Periaquaductal grey, dorsal nTPM: 55.8
1840
Male, age 53, unknown
61.0
2850
Male, age 76, both hemispheres
60.0
1831
Male, age 72, unknown
56.7
2464
Female, age 72, unknown
45.2
Periaquaductal grey, lateral nTPM: 57.5
2053
Male, age 18, unknown
64.8
2272
Male, age 74, both hemispheres
55.8
2140
Male, age 76, both hemispheres
51.9
Pretectal area nTPM: 63.1
1944
Female, age 72, unknown
69.3
1815
Male, age 53, unknown
68.6
2224
Female, age 72, unknown
67.9
1816
Male, age 51, unknown
67.1
1817
Female, age 42, unknown
67.1
2007
Male, age 72, unknown
65.0
2825
Male, age 18, unknown
64.2
2667
Female, age 75, unknown
60.6
2316
Male, age 76, right hemisphere
59.7
2273
Male, age 74, both hemispheres
57.4
2407
Male, age 75, both hemispheres
47.1
Red nucleus nTPM: 70.5
1904
Male, age 53, unknown
81.4
1821
Female, age 72, unknown
80.7
2503
Female, age 72, unknown
80.0
1865
Male, age 51, unknown
77.8
2785
Male, age 18, unknown
77.1
2227
Male, age 72, unknown
71.0
1954
Female, age 42, unknown
68.0
2769
Male, age 72, unknown
66.4
2725
Female, age 75, unknown
65.4
2823
Male, age 76, right hemisphere
63.8
2584
Male, age 75, left hemisphere
61.4
2588
Male, age 74, left hemisphere
53.3
Substantia nigra nTPM: 58.5
2699
Male, age 18, unknown
64.4
1851
Male, age 51, unknown
63.6
1889
Female, age 72, unknown
61.5
1941
Male, age 53, unknown
61.4
1916
Female, age 42, unknown
60.9
2590
Female, age 75, unknown
56.8
2665
Male, age 74, both hemispheres
55.4
2583
Male, age 75, right hemisphere
53.9
2241
Male, age 72, unknown
53.7
2409
Female, age 72, unknown
53.6
Superior colliculus nTPM: 64.5
1913
Female, age 42, unknown
81.1
2587
Male, age 74, left hemisphere
76.1
1895
Male, age 76, right hemisphere
71.1
1995
Male, age 72, unknown
69.8
2668
Female, age 75, unknown
65.5
1796
Male, age 53, unknown
64.3
1839
Male, age 51, unknown
58.2
2087
Female, age 72, unknown
56.7
2664
Male, age 75, both hemispheres
54.5
2261
Male, age 18, unknown
47.4
Ventral tegmental area nTPM: 61.0
2223
Female, age 72, unknown
68.7
2410
Female, age 72, unknown
65.2
1915
Female, age 42, unknown
61.4
2218
Male, age 76, both hemispheres
58.3
1942
Male, age 51, unknown
57.6
2021
Male, age 53, unknown
55.0
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
56.9
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 56.9
Samples: 139
Max nTPM: 187.4
Min nTPM: 26.5
Std nTPM: 22.3
Median nTPM: 52.6
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
187.4
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
146.7
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
133.6
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
124.2
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
106.6
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
93.8
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
93.7
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
93.3
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
91.7
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
87.6
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
85.3
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
79.1
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
77.8
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
76.7
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
76.7
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
75.8
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
75.4
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
74.8
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
74.1
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
74.0
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
73.2
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
72.9
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
71.4
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
70.8
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
70.5
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
70.1
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
68.7
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
67.2
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
66.6
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
66.5
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
66.3
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
65.2
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
65.1
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
64.6
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
64.2
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
64.2
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
64.2
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
63.8
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
63.7
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
63.2
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
63.1
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
62.6
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
61.0
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
60.9
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
60.3
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
59.8
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
59.5
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
59.1
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
58.9
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
58.8
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
58.1
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
57.9
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
57.5
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
57.0
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
56.9
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
56.9
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
56.5
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
56.4
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
56.3
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
56.2
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
56.2
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
55.8
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
55.3
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
55.1
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
54.8
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
53.9
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
53.4
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
53.1
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
52.7
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
52.6
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
52.6
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
52.5
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
52.2
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
52.0
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
51.7
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
51.7
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
51.4
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
51.2
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
50.5
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
50.2
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
49.7
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
49.7
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
49.6
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
49.5
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
49.4
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
49.2
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
48.9
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
48.5
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
48.3
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
48.1
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
47.9
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
47.7
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
46.9
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
46.7
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
46.4
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
46.4
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
45.9
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
45.6
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
45.6
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
45.3
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
44.9
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
44.9
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
43.9
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
43.7
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
43.6
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
43.0
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
42.6
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
41.9
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
41.8
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
40.7
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
40.7
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
40.6
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
40.4
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
40.0
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
39.7
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
39.1
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
38.8
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
38.6
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
38.5
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
38.0
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
37.9
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
37.3
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
37.1
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
36.0
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
36.0
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
35.6
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
35.0
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
34.7
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
34.5
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
33.3
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
32.7
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
32.7
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
30.4
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
29.6
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
29.2
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
28.7
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
28.0
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
27.3
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
26.5
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.