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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
180.7
nTPM
Monaco:
160.1
nTPM
Schmiedel:
52.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
180.7
HPA sample
nTPM
gdT-cell nTPM: 133.0
Samples: 6
Max nTPM: 176.9
Min nTPM: 95.8
P10809_1007
95.8
P10809_1022
152.1
P10809_1041
176.9
P10809_1060
126.2
P10809_1077
102.8
P10809_1098
144.3
MAIT T-cell nTPM: 128.5
Samples: 6
Max nTPM: 165.5
Min nTPM: 88.9
P10809_1006
90.6
P10809_1024
136.6
P10809_1043
165.5
P10809_1062
126.8
P10809_1083
88.9
P10809_1097
162.5
Memory CD4 T-cell nTPM: 122.0
Samples: 6
Max nTPM: 156.5
Min nTPM: 87.7
P10809_1014
87.7
P10809_1026
117.4
P10809_1045
156.5
P10809_1064
125.3
P10809_1086
110.1
P10809_1113
134.9
Memory CD8 T-cell nTPM: 129.1
Samples: 5
Max nTPM: 152.4
Min nTPM: 90.0
P10809_1012
90.0
P10809_1027
112.8
P10809_1046
152.4
P10809_1065
141.3
P10809_1111
149.0
Naive CD4 T-cell nTPM: 112.2
Samples: 6
Max nTPM: 149.4
Min nTPM: 68.1
P10809_1015
68.1
P10809_1030
132.6
P10809_1049
149.4
P10809_1068
108.5
P10809_1085
102.5
P10809_1112
111.9
Naive CD8 T-cell nTPM: 110.2
Samples: 6
Max nTPM: 122.6
Min nTPM: 69.6
P10809_1016
69.6
P10809_1031
111.0
P10809_1050
122.6
P10809_1069
119.6
P10809_1087
116.0
P10809_1110
122.1
T-reg nTPM: 180.7
Samples: 6
Max nTPM: 239.5
Min nTPM: 122.1
P10809_1018
122.1
P10809_1037
180.4
P10809_1056
239.5
P10809_1075
172.6
P10809_1094
171.6
P10809_1106
197.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
160.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 129.6
Samples: 4
Max nTPM: 160.8
Min nTPM: 89.5
RHH5202_R3573
149.0
RHH5230_R3602
118.9
RHH5259_R3631
89.5
RHH5288_R3660
160.8
Effector memory CD8 T-cell nTPM: 151.4
Samples: 4
Max nTPM: 204.1
Min nTPM: 111.1
RHH5203_R3574
138.7
RHH5231_R3603
151.5
RHH5260_R3632
111.1
RHH5289_R3661
204.1
MAIT T-cell nTPM: 127.4
Samples: 4
Max nTPM: 151.2
Min nTPM: 106.6
RHH5233_R3605
151.2
RHH5205_R3576
106.6
RHH5262_R3634
123.3
RHH5297_R3663
128.5
Memory CD4 T-cell TFH nTPM: 138.5
Samples: 4
Max nTPM: 154.1
Min nTPM: 125.4
RHH5300_R3666
125.4
RHH5236_R3608
154.1
RHH5265_R3637
134.6
RHH5208_R3579
140.0
Memory CD4 T-cell Th1 nTPM: 135.8
Samples: 4
Max nTPM: 154.1
Min nTPM: 113.3
RHH5210_R3581
145.2
RHH5302_R3668
154.1
RHH5238_R3610
113.3
RHH5267_R3639
130.4
Memory CD4 T-cell Th1/Th17 nTPM: 128.0
Samples: 4
Max nTPM: 172.0
Min nTPM: 65.4
RHH5303_R3669
164.9
RHH5211_R3582
172.0
RHH5239_R3611
65.4
RHH5268_R3640
109.8
Memory CD4 T-cell Th17 nTPM: 125.8
Samples: 4
Max nTPM: 157.0
Min nTPM: 110.2
RHH5304_R3670
119.6
RHH5212_R3583
157.0
RHH5240_R3612
116.5
RHH5269_R3641
110.2
Memory CD4 T-cell Th2 nTPM: 141.7
Samples: 4
Max nTPM: 163.7
Min nTPM: 118.7
RHH5305_R3671
154.2
RHH5213_R3584
130.1
RHH5241_R3613
163.7
RHH5270_R3642
118.7
Naive CD4 T-cell nTPM: 124.9
Samples: 4
Max nTPM: 144.2
Min nTPM: 102.9
RHH5306_R3672
111.1
RHH5214_R3585
141.5
RHH5242_R3614
144.2
RHH5271_R3643
102.9
Naive CD8 T-cell nTPM: 129.6
Samples: 4
Max nTPM: 154.3
Min nTPM: 95.1
RHH5201_R3572
154.3
RHH5229_R3601
95.1
RHH5258_R3630
142.3
RHH5287_R3659
126.6
Non-Vd2 gdTCR nTPM: 160.1
Samples: 4
Max nTPM: 178.0
Min nTPM: 129.6
RHH5235_R3607
129.6
RHH5264_R3636
178.0
RHH5207_R3578
165.9
RHH5299_R3665
166.9
T-reg nTPM: 155.1
Samples: 4
Max nTPM: 204.5
Min nTPM: 117.8
RHH5301_R3667
158.6
RHH5237_R3609
204.5
RHH5266_R3638
117.8
RHH5209_R3580
139.6
Terminal effector memory CD4 T-cell nTPM: 156.9
Samples: 2
Max nTPM: 163.8
Min nTPM: 149.9
RHH5243_R3615
163.8
RHH5272_R3644
149.9
Terminal effector memory CD8 T-cell nTPM: 159.0
Samples: 4
Max nTPM: 179.8
Min nTPM: 108.9
RHH5232_R3604
174.2
RHH5204_R3575
173.1
RHH5261_R3633
108.9
RHH5296_R3662
179.8
Vd2 gdTCR nTPM: 142.1
Samples: 4
Max nTPM: 200.1
Min nTPM: 117.4
RHH5234_R3606
125.9
RHH5206_R3577
200.1
RHH5263_R3635
117.4
RHH5298_R3664
125.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
