HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:40.4 nTPM
HPA Brain:5.4 nTPM
GTEx:40.4 nTPM
FANTOM5:24.8 Scaled Tags Per Million
Pig:14.8 nTPM
Mouse:4.2 nTPM
Allen mouse:0.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA005157
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 5.4
Sample id Sample description nTPM
Hippocampus
nTPM: 5.1
2529 Female, age 94, left hemisphere 6.3
1855 Male, age 76, left hemisphere 6.2
2621 Female, age 67, right hemisphere 5.8
2148 Female, age 91, left hemisphere 5.3
1911 Female, age 85, right hemisphere 3.8
1898 Male, age 80, left hemisphere 3.0
Dentate gyrus
nTPM: 4.5
2010 Male, age 76, both hemispheres 5.7
2528 Male, age 74, both hemispheres 5.7
2531 Female, age 67, both hemispheres 5.0
2530 Female, age 94, left hemisphere 4.2
2246 Female, age 85, both hemispheres 3.5
1927 Female, age 91, both hemispheres 3.0
Entorhinal gyrus
nTPM: 5.4
2117 Female, age 91, right hemisphere 7.9
2764 Male, age 80, right hemisphere 6.6
1938 Female, age 85, left hemisphere 5.9
2686 Male, age 75, right hemisphere 4.8
2613 Female, age 94, left hemisphere 4.3
1787 Male, age 76, left hemisphere 3.2
Hippocampus, CA1
nTPM: 4.9
2749 Male, age 80, left hemisphere 5.5
2045 Male, age 76, both hemispheres 5.4
2527 Male, age 74, both hemispheres 5.2
1873 Female, age 85, both hemispheres 4.5
2082 Female, age 91, right hemisphere 4.1
Hippocampus, CA2
nTPM: 5.3
1963 Male, age 80, left hemisphere 7.9
1892 Male, age 76, both hemispheres 5.2
1940 Female, age 85, left hemisphere 5.2
2249 Male, age 74, both hemispheres 4.9
2437 Female, age 94, left hemisphere 4.9
2113 Female, age 91, right hemisphere 3.6
Hippocampus, CA3
nTPM: 4.5
1867 Male, age 76, both hemispheres 6.7
2861 Female, age 67, both hemispheres 5.8
2620 Female, age 94, left hemisphere 4.6
2436 Male, age 74, both hemispheres 4.3
1891 Female, age 85, both hemispheres 2.9
2137 Male, age 80, left hemisphere 2.7
Parahippocampal cortex
nTPM: 4.1
2622 Female, age 67, right hemisphere 5.5
2532 Female, age 72, left hemisphere 4.8
2250 Female, age 67, right hemisphere 4.4
2245 Female, age 91, both hemispheres 4.1
2018 Male, age 76, both hemispheres 3.9
2693 Female, age 94, both hemispheres 3.9
1990 Female, age 91, right hemisphere 3.8
1933 Female, age 85, both hemispheres 3.7
1850 Male, age 80, both hemispheres 3.5
2692 Male, age 74, both hemispheres 3.0
Perirhinal gyrus
nTPM: 3.9
1794 Male, age 80, right hemisphere 4.5
1847 Female, age 91, left hemisphere 4.5
2848 Male, age 76, right hemisphere 4.1
2521 Female, age 94, right hemisphere 4.0
1841 Female, age 85, right hemisphere 2.3
Subiculum
nTPM: 4.6
2729 Female, age 91, right hemisphere 5.6
2619 Male, age 74, both hemispheres 5.3
1977 Female, age 85, both hemispheres 4.6
1901 Male, age 80, both hemispheres 4.4
2042 Male, age 76, both hemispheres 4.3
2438 Female, age 94, left hemisphere 3.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 40.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 40.4
Samples: 197

Max nTPM: 119.9
Min nTPM: 10.4
Std nTPM: 16.6
Median nTPM: 37.9
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 119.9
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 91.7
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 85.2
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 79.5
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 78.3
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 76.7
GTEX-ZVZQ-0011-R1a-SM-57WBU 60-69 years, female 76.0
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 75.3
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 74.5
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 74.1
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 73.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 24.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 24.8
FF:10169-103B7 60 years, female 25.9
FF:10153-102I9 76 years, female 23.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 14.8
Pig sample Sample description nTPM
Subiculum
nTPM: 14.8
Samples: 4

Max nTPM: 15.5
Min nTPM: 14.0
Sample A Female 14.0
Sample B Female 15.5
Sample C Male 15.4
Sample D Male 14.4
Dorsal hippocampus
nTPM: 12.8
Samples: 4

Max nTPM: 13.8
Min nTPM: 11.5
Sample A Female 11.5
Sample B Female 12.9
Sample C Male 13.0
Sample D Male 13.8
Entorhinal cortex
nTPM: 13.7
Samples: 4

Max nTPM: 15.4
Min nTPM: 12.7
Sample A Female 12.7
Sample B Female 12.7
Sample C Male 14.1
Sample D Male 15.4
Ventral hippocampus
nTPM: 14.7
Samples: 4

Max nTPM: 15.8
Min nTPM: 13.3
Sample A Female 13.3
Sample B Female 15.8
Sample C Male 15.5
Sample D Male 14.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 4.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 3.7
Samples: 4

Max nTPM: 4.2
Min nTPM: 3.1
Sample A Male 4.1
Sample B Male 3.4
Sample C Female 4.2
Sample D Female 3.1
Hippocampal formation
nTPM: 4.2
Samples: 4

Max nTPM: 4.7
Min nTPM: 3.6
Sample A Male 4.7
Sample B Male 4.5
Sample C Female 3.6
Sample D Female 4.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.7
70192171 Antisense, RP_050517_01_D06, Mouse strain C57BL/6J (56 days, male) 0.7

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