HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:111.9 nTPM
HPA Brain:166.2 nTPM
GTEx:111.9 nTPM
FANTOM5:191.8 Scaled Tags Per Million
Pig:184.2 nTPM
Mouse:174.1 nTPM
Allen mouse:21.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA046149Antibody HPA050196Antibody CAB010100
Glial cells Not detectedNot detectedLow
Neuronal cells HighMediumHigh







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 166.2
Sample id Sample description nTPM
Hippocampus
nTPM: 142.2
1898 Male, age 80, left hemisphere 191.1
2621 Female, age 67, right hemisphere 159.7
1855 Male, age 76, left hemisphere 143.9
2148 Female, age 91, left hemisphere 143.7
1911 Female, age 85, right hemisphere 115.2
2529 Female, age 94, left hemisphere 99.3
Dentate gyrus
nTPM: 160.9
1927 Female, age 91, both hemispheres 196.7
2530 Female, age 94, left hemisphere 184.6
2531 Female, age 67, both hemispheres 164.1
2010 Male, age 76, both hemispheres 159.7
2246 Female, age 85, both hemispheres 133.0
2528 Male, age 74, both hemispheres 127.1
Entorhinal gyrus
nTPM: 120.2
2764 Male, age 80, right hemisphere 149.1
2613 Female, age 94, left hemisphere 137.1
1938 Female, age 85, left hemisphere 129.8
1787 Male, age 76, left hemisphere 121.3
2117 Female, age 91, right hemisphere 97.8
2686 Male, age 75, right hemisphere 86.1
Hippocampus, CA1
nTPM: 166.2
2749 Male, age 80, left hemisphere 263.9
2045 Male, age 76, both hemispheres 173.1
1873 Female, age 85, both hemispheres 172.5
2527 Male, age 74, both hemispheres 121.6
2082 Female, age 91, right hemisphere 99.9
Hippocampus, CA2
nTPM: 143.2
1963 Male, age 80, left hemisphere 197.8
1892 Male, age 76, both hemispheres 174.3
2437 Female, age 94, left hemisphere 143.3
1940 Female, age 85, left hemisphere 123.0
2249 Male, age 74, both hemispheres 118.3
2113 Female, age 91, right hemisphere 102.7
Hippocampus, CA3
nTPM: 157.4
2620 Female, age 94, left hemisphere 218.9
2137 Male, age 80, left hemisphere 189.2
2861 Female, age 67, both hemispheres 146.7
1867 Male, age 76, both hemispheres 141.1
2436 Male, age 74, both hemispheres 131.2
1891 Female, age 85, both hemispheres 117.5
Parahippocampal cortex
nTPM: 122.7
1850 Male, age 80, both hemispheres 154.8
2245 Female, age 91, both hemispheres 151.3
1990 Female, age 91, right hemisphere 130.3
2532 Female, age 72, left hemisphere 127.2
1933 Female, age 85, both hemispheres 127.0
2250 Female, age 67, right hemisphere 122.5
2693 Female, age 94, both hemispheres 118.3
2018 Male, age 76, both hemispheres 106.2
2692 Male, age 74, both hemispheres 99.1
2622 Female, age 67, right hemisphere 89.9
Perirhinal gyrus
nTPM: 160.0
2521 Female, age 94, right hemisphere 192.0
1847 Female, age 91, left hemisphere 177.7
1794 Male, age 80, right hemisphere 176.1
1841 Female, age 85, right hemisphere 146.5
2848 Male, age 76, right hemisphere 108.0
Subiculum
nTPM: 116.0
1901 Male, age 80, both hemispheres 145.7
1977 Female, age 85, both hemispheres 122.3
2438 Female, age 94, left hemisphere 108.4
2729 Female, age 91, right hemisphere 106.8
2619 Male, age 74, both hemispheres 106.7
2042 Male, age 76, both hemispheres 106.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 111.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 111.9
Samples: 197

Max nTPM: 307.3
Min nTPM: 39.8
Std nTPM: 49.8
Median nTPM: 102.7
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 307.3
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 284.8
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 242.8
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 239.1
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 231.2
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 226.0
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 223.0
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 221.0
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 217.0
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 214.3
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 214.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 191.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 191.8
FF:10169-103B7 60 years, female 261.7
FF:10153-102I9 76 years, female 121.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 184.2
Pig sample Sample description nTPM
Subiculum
nTPM: 102.4
Samples: 4

Max nTPM: 137.5
Min nTPM: 88.0
Sample A Female 137.5
Sample B Female 88.0
Sample C Male 94.9
Sample D Male 89.2
Dorsal hippocampus
nTPM: 184.2
Samples: 4

Max nTPM: 234.2
Min nTPM: 152.6
Sample A Female 234.2
Sample B Female 185.0
Sample C Male 152.6
Sample D Male 164.9
Entorhinal cortex
nTPM: 121.4
Samples: 4

Max nTPM: 134.9
Min nTPM: 115.0
Sample A Female 134.9
Sample B Female 116.7
Sample C Male 115.0
Sample D Male 118.8
Ventral hippocampus
nTPM: 139.3
Samples: 4

Max nTPM: 190.3
Min nTPM: 84.5
Sample A Female 131.1
Sample B Female 84.5
Sample C Male 151.4
Sample D Male 190.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 174.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 149.7
Samples: 4

Max nTPM: 162.1
Min nTPM: 131.0
Sample A Male 155.3
Sample B Male 162.1
Sample C Female 150.3
Sample D Female 131.0
Hippocampal formation
nTPM: 174.1
Samples: 4

Max nTPM: 190.2
Min nTPM: 167.6
Sample A Male 168.5
Sample B Male 167.6
Sample C Female 190.2
Sample D Female 170.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 21.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 21.9
532632 Antisense, RP_040810_02_G07, Mouse strain C57BL/6J (56 days, male) 21.9

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