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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
112.6
nTPM
Monaco:
205.3
nTPM
Schmiedel:
34.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
112.6
HPA sample
nTPM
gdT-cell nTPM: 96.3
Samples: 6
Max nTPM: 123.7
Min nTPM: 79.1
P10809_1007
79.1
P10809_1022
123.7
P10809_1041
84.6
P10809_1060
95.3
P10809_1077
92.9
P10809_1098
102.1
MAIT T-cell nTPM: 81.5
Samples: 6
Max nTPM: 104.5
Min nTPM: 69.6
P10809_1006
70.7
P10809_1024
104.5
P10809_1043
69.6
P10809_1062
85.5
P10809_1083
79.4
P10809_1097
79.1
Memory CD4 T-cell nTPM: 83.1
Samples: 6
Max nTPM: 94.8
Min nTPM: 70.4
P10809_1014
76.8
P10809_1026
94.8
P10809_1045
83.2
P10809_1064
81.7
P10809_1086
70.4
P10809_1113
91.9
Memory CD8 T-cell nTPM: 94.3
Samples: 5
Max nTPM: 102.3
Min nTPM: 89.9
P10809_1012
89.9
P10809_1027
102.3
P10809_1046
97.7
P10809_1065
91.2
P10809_1111
90.4
Naive CD4 T-cell nTPM: 85.0
Samples: 6
Max nTPM: 96.2
Min nTPM: 65.8
P10809_1015
65.8
P10809_1030
88.7
P10809_1049
93.3
P10809_1068
88.2
P10809_1085
78.0
P10809_1112
96.2
Naive CD8 T-cell nTPM: 85.6
Samples: 6
Max nTPM: 103.7
Min nTPM: 74.9
P10809_1016
75.1
P10809_1031
89.0
P10809_1050
74.9
P10809_1069
103.7
P10809_1087
77.1
P10809_1110
93.6
T-reg nTPM: 112.6
Samples: 6
Max nTPM: 144.9
Min nTPM: 76.9
P10809_1018
109.9
P10809_1037
109.4
P10809_1056
76.9
P10809_1075
114.1
P10809_1094
144.9
P10809_1106
120.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
205.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 146.0
Samples: 4
Max nTPM: 215.6
Min nTPM: 84.3
RHH5202_R3573
215.6
RHH5230_R3602
126.3
RHH5259_R3631
84.3
RHH5288_R3660
157.8
Effector memory CD8 T-cell nTPM: 194.5
Samples: 4
Max nTPM: 237.3
Min nTPM: 148.2
RHH5203_R3574
237.3
RHH5231_R3603
184.4
RHH5260_R3632
148.2
RHH5289_R3661
208.2
MAIT T-cell nTPM: 157.9
Samples: 4
Max nTPM: 182.4
Min nTPM: 116.9
RHH5233_R3605
168.0
RHH5205_R3576
164.2
RHH5262_R3634
182.4
RHH5297_R3663
116.9
Memory CD4 T-cell TFH nTPM: 150.9
Samples: 4
Max nTPM: 186.6
Min nTPM: 121.0
RHH5300_R3666
121.0
RHH5236_R3608
161.9
RHH5265_R3637
134.2
RHH5208_R3579
186.6
Memory CD4 T-cell Th1 nTPM: 139.2
Samples: 4
Max nTPM: 183.7
Min nTPM: 94.6
RHH5210_R3581
183.7
RHH5302_R3668
139.1
RHH5238_R3610
94.6
RHH5267_R3639
139.3
Memory CD4 T-cell Th1/Th17 nTPM: 156.3
Samples: 4
Max nTPM: 233.2
Min nTPM: 74.0
RHH5303_R3669
199.4
RHH5211_R3582
233.2
RHH5239_R3611
74.0
RHH5268_R3640
118.5
Memory CD4 T-cell Th17 nTPM: 135.9
Samples: 4
Max nTPM: 157.6
Min nTPM: 83.8
RHH5304_R3670
157.6
RHH5212_R3583
147.0
RHH5240_R3612
155.1
RHH5269_R3641
83.8
Memory CD4 T-cell Th2 nTPM: 170.1
Samples: 4
Max nTPM: 231.0
Min nTPM: 130.4
RHH5305_R3671
179.1
RHH5213_R3584
231.0
RHH5241_R3613
130.4
RHH5270_R3642
140.0
Naive CD4 T-cell nTPM: 144.9
Samples: 4
Max nTPM: 188.8
Min nTPM: 116.9
RHH5306_R3672
116.9
RHH5214_R3585
188.8
RHH5242_R3614
154.6
RHH5271_R3643
119.3
Naive CD8 T-cell nTPM: 124.4
Samples: 4
Max nTPM: 145.1
Min nTPM: 87.0
RHH5201_R3572
145.1
RHH5229_R3601
87.0
RHH5258_R3630
131.8
RHH5287_R3659
133.8
Non-Vd2 gdTCR nTPM: 176.8
Samples: 4
Max nTPM: 200.2
Min nTPM: 156.7
RHH5235_R3607
156.7
RHH5264_R3636
200.2
RHH5207_R3578
175.0
RHH5299_R3665
175.1
T-reg nTPM: 142.8
Samples: 4
Max nTPM: 162.9
Min nTPM: 125.0
RHH5301_R3667
146.7
RHH5237_R3609
136.7
RHH5266_R3638
125.0
RHH5209_R3580
162.9
Terminal effector memory CD4 T-cell nTPM: 184.4
Samples: 2
Max nTPM: 223.6
Min nTPM: 145.1
RHH5243_R3615
145.1
RHH5272_R3644
223.6
Terminal effector memory CD8 T-cell nTPM: 205.3
Samples: 4
Max nTPM: 306.8
Min nTPM: 147.5
RHH5232_R3604
306.8
RHH5204_R3575
155.7
RHH5261_R3633
147.5
RHH5296_R3662
211.2
Vd2 gdTCR nTPM: 180.1
Samples: 4
Max nTPM: 236.2
Min nTPM: 144.7
RHH5234_R3606
181.4
RHH5206_R3577
236.2
RHH5263_R3635
144.7
RHH5298_R3664
158.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
