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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
404.6
nTPM
Monaco:
117.9
nTPM
Schmiedel:
55.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
404.6
HPA sample
nTPM
gdT-cell nTPM: 373.2
Samples: 6
Max nTPM: 530.2
Min nTPM: 250.7
P10809_1007
250.7
P10809_1022
423.2
P10809_1041
530.2
P10809_1060
301.1
P10809_1077
347.4
P10809_1098
386.6
MAIT T-cell nTPM: 314.4
Samples: 6
Max nTPM: 411.4
Min nTPM: 176.1
P10809_1006
176.1
P10809_1024
330.5
P10809_1043
411.4
P10809_1062
312.6
P10809_1083
303.7
P10809_1097
352.0
Memory CD4 T-cell nTPM: 332.0
Samples: 6
Max nTPM: 401.6
Min nTPM: 196.8
P10809_1014
196.8
P10809_1026
401.6
P10809_1045
351.3
P10809_1064
373.7
P10809_1086
333.2
P10809_1113
335.6
Memory CD8 T-cell nTPM: 325.0
Samples: 5
Max nTPM: 397.0
Min nTPM: 202.4
P10809_1012
202.4
P10809_1027
327.2
P10809_1046
381.3
P10809_1065
397.0
P10809_1111
317.3
Naive CD4 T-cell nTPM: 223.0
Samples: 6
Max nTPM: 321.6
Min nTPM: 130.1
P10809_1015
130.1
P10809_1030
238.5
P10809_1049
321.6
P10809_1068
199.4
P10809_1085
236.7
P10809_1112
211.9
Naive CD8 T-cell nTPM: 299.7
Samples: 6
Max nTPM: 374.3
Min nTPM: 221.2
P10809_1016
221.2
P10809_1031
286.2
P10809_1050
314.5
P10809_1069
374.3
P10809_1087
338.6
P10809_1110
263.6
T-reg nTPM: 404.7
Samples: 6
Max nTPM: 623.7
Min nTPM: 226.1
P10809_1018
226.1
P10809_1037
311.3
P10809_1056
623.7
P10809_1075
366.0
P10809_1094
477.9
P10809_1106
422.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
117.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 61.3
Samples: 4
Max nTPM: 97.8
Min nTPM: 40.3
RHH5202_R3573
40.3
RHH5230_R3602
50.2
RHH5259_R3631
56.7
RHH5288_R3660
97.8
Effector memory CD8 T-cell nTPM: 46.3
Samples: 4
Max nTPM: 54.8
Min nTPM: 37.3
RHH5203_R3574
37.3
RHH5231_R3603
54.8
RHH5260_R3632
52.5
RHH5289_R3661
40.7
MAIT T-cell nTPM: 77.1
Samples: 4
Max nTPM: 128.2
Min nTPM: 50.5
RHH5233_R3605
63.8
RHH5205_R3576
50.5
RHH5262_R3634
65.9
RHH5297_R3663
128.2
Memory CD4 T-cell TFH nTPM: 70.9
Samples: 4
Max nTPM: 124.5
Min nTPM: 41.0
RHH5300_R3666
74.6
RHH5236_R3608
124.5
RHH5265_R3637
41.0
RHH5208_R3579
43.4
Memory CD4 T-cell Th1 nTPM: 72.0
Samples: 4
Max nTPM: 124.2
Min nTPM: 34.0
RHH5210_R3581
34.0
RHH5302_R3668
124.2
RHH5238_R3610
77.3
RHH5267_R3639
52.4
Memory CD4 T-cell Th1/Th17 nTPM: 68.8
Samples: 4
Max nTPM: 104.1
Min nTPM: 35.7
RHH5303_R3669
104.1
RHH5211_R3582
70.9
RHH5239_R3611
35.7
RHH5268_R3640
64.3
Memory CD4 T-cell Th17 nTPM: 63.5
Samples: 4
Max nTPM: 78.4
Min nTPM: 47.7
RHH5304_R3670
78.4
RHH5212_R3583
71.9
RHH5240_R3612
55.9
RHH5269_R3641
47.7
Memory CD4 T-cell Th2 nTPM: 65.8
Samples: 4
Max nTPM: 94.3
Min nTPM: 39.1
RHH5305_R3671
94.3
RHH5213_R3584
66.2
RHH5241_R3613
63.6
RHH5270_R3642
39.1
Naive CD4 T-cell nTPM: 52.4
Samples: 4
Max nTPM: 72.1
Min nTPM: 28.0
RHH5306_R3672
72.1
RHH5214_R3585
71.1
RHH5242_R3614
38.2
RHH5271_R3643
28.0
Naive CD8 T-cell nTPM: 42.2
Samples: 4
Max nTPM: 53.6
Min nTPM: 26.7
RHH5201_R3572
26.7
RHH5229_R3601
39.6
RHH5258_R3630
49.0
RHH5287_R3659
53.6
Non-Vd2 gdTCR nTPM: 83.6
Samples: 4
Max nTPM: 130.4
Min nTPM: 53.6
RHH5235_R3607
53.6
RHH5264_R3636
81.1
RHH5207_R3578
69.2
RHH5299_R3665
130.4
T-reg nTPM: 74.0
Samples: 4
Max nTPM: 108.8
Min nTPM: 46.8
RHH5301_R3667
108.8
RHH5237_R3609
74.6
RHH5266_R3638
46.8
RHH5209_R3580
65.7
Terminal effector memory CD4 T-cell nTPM: 70.0
Samples: 2
Max nTPM: 76.0
Min nTPM: 64.0
RHH5243_R3615
76.0
RHH5272_R3644
64.0
Terminal effector memory CD8 T-cell nTPM: 105.1
Samples: 4
Max nTPM: 214.7
Min nTPM: 41.9
RHH5232_R3604
41.9
RHH5204_R3575
214.7
RHH5261_R3633
81.8
RHH5296_R3662
82.0
Vd2 gdTCR nTPM: 117.9
Samples: 4
Max nTPM: 197.0
Min nTPM: 59.1
RHH5234_R3606
59.5
RHH5206_R3577
197.0
RHH5263_R3635
59.1
RHH5298_R3664
156.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
