HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:86.5 nTPM
HPA Brain:123.5 nTPM
GTEx:86.5 nTPM
FANTOM5:8.0 Scaled Tags Per Million
Pig:38.1 nTPM
Mouse:21.6 nTPM
Allen mouse:2.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA046699
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 123.5
Sample id Sample description nTPM
Hippocampus
nTPM: 96.8
2148 Female, age 91, left hemisphere 116.8
1855 Male, age 76, left hemisphere 105.0
2621 Female, age 67, right hemisphere 103.8
1911 Female, age 85, right hemisphere 100.7
2529 Female, age 94, left hemisphere 80.8
1898 Male, age 80, left hemisphere 73.6
Dentate gyrus
nTPM: 92.3
2531 Female, age 67, both hemispheres 129.0
1927 Female, age 91, both hemispheres 107.2
2246 Female, age 85, both hemispheres 101.7
2010 Male, age 76, both hemispheres 84.3
2528 Male, age 74, both hemispheres 81.0
2530 Female, age 94, left hemisphere 50.3
Entorhinal gyrus
nTPM: 117.5
2613 Female, age 94, left hemisphere 176.4
2686 Male, age 75, right hemisphere 135.5
2764 Male, age 80, right hemisphere 133.8
1938 Female, age 85, left hemisphere 111.9
1787 Male, age 76, left hemisphere 82.4
2117 Female, age 91, right hemisphere 64.9
Hippocampus, CA1
nTPM: 121.1
2045 Male, age 76, both hemispheres 164.0
2749 Male, age 80, left hemisphere 132.4
2082 Female, age 91, right hemisphere 128.9
2527 Male, age 74, both hemispheres 97.2
1873 Female, age 85, both hemispheres 83.1
Hippocampus, CA2
nTPM: 83.3
2113 Female, age 91, right hemisphere 115.9
1940 Female, age 85, left hemisphere 110.7
1892 Male, age 76, both hemispheres 78.3
2249 Male, age 74, both hemispheres 77.6
1963 Male, age 80, left hemisphere 72.9
2437 Female, age 94, left hemisphere 44.7
Hippocampus, CA3
nTPM: 111.7
2137 Male, age 80, left hemisphere 168.8
2620 Female, age 94, left hemisphere 138.8
2861 Female, age 67, both hemispheres 135.0
1867 Male, age 76, both hemispheres 88.4
2436 Male, age 74, both hemispheres 74.9
1891 Female, age 85, both hemispheres 64.4
Parahippocampal cortex
nTPM: 111.8
2622 Female, age 67, right hemisphere 152.0
2245 Female, age 91, both hemispheres 147.3
1850 Male, age 80, both hemispheres 116.4
2532 Female, age 72, left hemisphere 112.1
1933 Female, age 85, both hemispheres 110.9
2018 Male, age 76, both hemispheres 109.7
2693 Female, age 94, both hemispheres 106.3
2692 Male, age 74, both hemispheres 90.3
1990 Female, age 91, right hemisphere 89.4
2250 Female, age 67, right hemisphere 83.5
Perirhinal gyrus
nTPM: 123.5
2521 Female, age 94, right hemisphere 148.1
1847 Female, age 91, left hemisphere 137.1
1794 Male, age 80, right hemisphere 121.2
2848 Male, age 76, right hemisphere 106.9
1841 Female, age 85, right hemisphere 103.9
Subiculum
nTPM: 75.5
2729 Female, age 91, right hemisphere 89.4
1977 Female, age 85, both hemispheres 86.6
2042 Male, age 76, both hemispheres 85.2
1901 Male, age 80, both hemispheres 84.9
2619 Male, age 74, both hemispheres 68.6
2438 Female, age 94, left hemisphere 38.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 86.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 86.5
Samples: 197

Max nTPM: 275.3
Min nTPM: 3.9
Std nTPM: 51.0
Median nTPM: 76.9
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 275.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 241.0
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 235.8
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 217.0
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 213.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 208.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 206.1
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 193.1
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 189.2
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 180.8
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 175.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 8.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 8.0
FF:10169-103B7 60 years, female 8.3
FF:10153-102I9 76 years, female 7.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 38.1
Pig sample Sample description nTPM
Subiculum
nTPM: 25.0
Samples: 4

Max nTPM: 33.1
Min nTPM: 21.0
Sample A Female 33.1
Sample B Female 22.9
Sample C Male 21.0
Sample D Male 23.1
Dorsal hippocampus
nTPM: 25.7
Samples: 4

Max nTPM: 37.3
Min nTPM: 17.2
Sample A Female 37.3
Sample B Female 23.9
Sample C Male 24.2
Sample D Male 17.2
Entorhinal cortex
nTPM: 38.1
Samples: 4

Max nTPM: 41.2
Min nTPM: 36.2
Sample A Female 38.7
Sample B Female 36.2
Sample C Male 41.2
Sample D Male 36.2
Ventral hippocampus
nTPM: 24.8
Samples: 4

Max nTPM: 29.8
Min nTPM: 20.0
Sample A Female 28.0
Sample B Female 20.0
Sample C Male 29.8
Sample D Male 21.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 21.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 21.6
Samples: 4

Max nTPM: 24.7
Min nTPM: 19.7
Sample A Male 21.7
Sample B Male 24.7
Sample C Female 20.4
Sample D Female 19.7
Hippocampal formation
nTPM: 20.5
Samples: 4

Max nTPM: 22.6
Min nTPM: 18.7
Sample A Male 21.4
Sample B Male 22.6
Sample C Female 19.2
Sample D Female 18.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.9
75692726 Antisense, RP_051214_02_A12, Mouse strain C57BL/6J (56 days, male) 2.9
74047845 Antisense, RP_051214_02_A12, Mouse strain C57BL/6J (56 days, male) 0.9

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