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                                  TISSUE PRIMARY DATA RETINA Show tissue menu
                                  ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
                                  ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
                                  ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
                                  SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
                                  ANTIBODIES
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                                  VALIDATION
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                                  Tissue proteome
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                                  Retina
                                  RETINA - Expression summary
                                  Protein expressioni

                                  On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

                                  Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

                                  If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

                                  No data
                                  RNA expressioni

                                  A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

                                  The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

                                  Scroll down to view mRNA expression data in more detail.
                                  Consensus:37.9 nTPM
                                  GTEx:37.9 nTPM
                                  FANTOM5:257.7 Scaled Tags Per Million
                                  Pig:26.7 nTPM
                                  Mouse:118.8 nTPM

                                  RETINA - GTEx RNA-seqi

                                  RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

                                  Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
                                  Average nTPM 37.9
                                  GTEx sample id Sample description nTPM
                                  32.339.643.515.656.40510152025303540455055
                                  32.339.643.515.656.40510152025303540455055
                                  Retina
                                  Average nTPM: 37.9
                                  Samples: 105

                                  Max nTPM: 56.4
                                  Min nTPM: 12.9
                                  Std nTPM: 9.1
                                  Median nTPM:
                                  322_1 76 years, male 56.4
                                  320_1 89 years, female 54.5
                                  377_1 82 years, female 52.8
                                  218_1 71 years, female 52.7
                                  295_1 61 years, female 52.2
                                  319_1 81 years, male 52.2
                                  452_1 88 years, female 51.8
                                  379_1 60 years, male 51.1
                                  375_1 74 years, female 50.2
                                  376_1 75 years, female 50.0
                                  318_1 68 years, male 49.0
                                  293_1 68 years, female 48.0
                                  163_1 78 years, male 47.8
                                  237_1 82 years, male 47.6
                                  384_1 83 years, male 46.9
                                  480_1 63 years, male 46.8
                                  172_1 72 years, female 46.1
                                  321_1 62 years, female 46.0
                                  351_1 91 years, male 45.8
                                  353_1 82 years, female 45.3
                                  386_1 76 years, male 45.2
                                  189_1 76 years, male 44.7
                                  405_1 91 years, male 44.4
                                  350_1 84 years, female 44.1
                                  406_1 79 years, male 43.9
                                  352_1 62 years, male 43.7
                                  354_1 81 years, female 43.5
                                  394_1 75 years, female 43.5
                                  317_1 60 years, male 43.4
                                  425_1 59 years, female 43.1
                                  292_1 71 years, male 42.8
                                  251_1 78 years, male 42.7
                                  264_1 73 years, female 42.7
                                  404_1 82 years, female 42.5
                                  348_1 84 years, male 42.2
                                  6_1 73 years, female 42.0
                                  389_1 86 years, female 42.0
                                  2_1 77 years, female 41.5
                                  137_1 83 years, male 41.5
                                  349_1 83 years, male 41.5
                                  335_1 73 years, female 41.3
                                  355_1 70 years, female 41.3
                                  316_1 62 years, male 40.8
                                  356_1 87 years, female 40.7
                                  35_1 74 years, female 40.5
                                  447_1 81 years, male 40.5
                                  506_1 65 years, male 40.5
                                  177_1 74 years, male 40.4
                                  526_1 61 years, male 40.3
                                  153_1 70 years, female 40.1
                                  286_1 68 years, female 40.1
                                  518_1 75 years, female 40.0
                                  41_1 94 years, female 39.6
                                  503_1 68 years, male 39.5
                                  229_1 69 years, female 39.3
                                  243_1 75 years, male 39.1
                                  173_1 67 years, male 38.9
                                  4_1 88 years, female 38.8
                                  99_1 64 years, male 38.6
                                  517_1 88 years, male 38.6
                                  347_1 72 years, male 38.3
                                  139_1 64 years, female 38.1
                                  254_1 77 years, female 37.9
                                  109_1 81 years, female 37.3
                                  266_1 85 years, male 37.3
                                  246_1 77 years, male 37.0
                                  17_1 71 years, male 36.4
                                  291_1 76 years, male 35.9
                                  265_1 87 years, male 35.6
                                  288_1 66 years, female 34.6
                                  115_1 83 years, male 34.2
                                  311_1 78 years, male 33.7
                                  396_1 62 years, male 33.7
                                  18_1 88 years, male 33.5
                                  142_1 61 years, female 33.2
                                  495_1 57 years, female 33.2
                                  307_1 66 years, female 32.5
                                  468_1 89 years, male 32.5
                                  126_1 63 years, male 32.3
                                  315_1 62 years, female 32.3
                                  120_1 70 years, female 32.0
                                  217_1 76 years, male 31.6
                                  314_1 67 years, male 31.4
                                  42_1 85 years, male 30.7
                                  324_1 76 years, male 30.2
                                  499_1 55 years, female 30.1
                                  145_1 84 years, male 29.5
                                  9_1 66 years, female 29.3
                                  117_1 61 years, male 29.2
                                  313_1 79 years, female 29.2
                                  162_1 79 years, female 27.2
                                  119_1 70 years, female 26.5
                                  43_1 64 years, female 25.0
                                  501_1 88 years, male 24.1
                                  308_1 70 years, female 23.7
                                  415_1 77 years, female 23.0
                                  81_1 67 years, male 22.5
                                  466_1 57 years, female 21.6
                                  32_1 67 years, male 21.4
                                  414_1 84 years, female 21.4
                                  89_1 63 years, male 21.2
                                  149_1 88 years, male 17.5
                                  413_1 59 years, female 15.6
                                  490_1 67 years, female 15.1
                                  491_1 89 years, female 12.9
                                  Show allShow less

                                  RETINA - FANTOM5 CAGEi

                                  RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

                                  Max Scaled Tags Per Million 257.7
                                  FANTOM5 sample id Sample description Scaled Tags Per Million
                                  Retina
                                  Scaled Tags Per Million: 257.7
                                  FF:10030-101E3 24-65 years, mixed 257.7

                                  RETINA - Pig RNA-seqi

                                  RNA-seq data obtained from pig brain is reported as nTPM .

                                  Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
                                  Average nTPM 26.7
                                  Pig sample Sample description nTPM
                                  24.825.727.621.925.7051015202530
                                  24.825.727.621.925.7051015202530
                                  Retina
                                  nTPM: 26.7
                                  Samples: 4

                                  Max nTPM: 33.5
                                  Min nTPM: 21.9
                                  Sample A Female 25.7
                                  Sample B Female 25.7
                                  Sample C Male 33.5
                                  Sample D Male 21.9

                                  RETINA - Mouse RNA-seqi

                                  RNA-seq data obtained from mouse brain is reported as nTPM .

                                  Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
                                  Average nTPM 118.8
                                  Mouse sample Sample description nTPM
                                  111.4118.4125.8107.3131.00102030405060708090100110120130
                                  111.4118.4125.8107.3131.00102030405060708090100110120130
                                  Retina
                                  nTPM: 118.8
                                  Samples: 4

                                  Max nTPM: 131.0
                                  Min nTPM: 107.3
                                  Sample A Male 124.0
                                  Sample B Male 112.8
                                  Sample C Female 131.0
                                  Sample D Female 107.3

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