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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
397.2
nTPM
Monaco:
142.3
nTPM
Schmiedel:
51.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
397.2
HPA sample
nTPM
gdT-cell nTPM: 330.1
Samples: 6
Max nTPM: 446.6
Min nTPM: 241.1
P10809_1007
241.1
P10809_1022
357.7
P10809_1041
446.6
P10809_1060
260.9
P10809_1077
353.5
P10809_1098
321.0
MAIT T-cell nTPM: 312.8
Samples: 6
Max nTPM: 413.1
Min nTPM: 176.5
P10809_1006
176.5
P10809_1024
383.5
P10809_1043
413.1
P10809_1062
272.8
P10809_1083
240.6
P10809_1097
390.1
Memory CD4 T-cell nTPM: 309.6
Samples: 6
Max nTPM: 390.3
Min nTPM: 207.8
P10809_1014
207.8
P10809_1026
390.3
P10809_1045
363.2
P10809_1064
305.4
P10809_1086
292.4
P10809_1113
298.6
Memory CD8 T-cell nTPM: 336.6
Samples: 5
Max nTPM: 395.0
Min nTPM: 243.0
P10809_1012
243.0
P10809_1027
359.4
P10809_1046
395.0
P10809_1065
310.1
P10809_1111
375.6
Naive CD4 T-cell nTPM: 281.0
Samples: 6
Max nTPM: 430.6
Min nTPM: 169.6
P10809_1015
169.6
P10809_1030
332.6
P10809_1049
430.6
P10809_1068
240.6
P10809_1085
238.5
P10809_1112
274.1
Naive CD8 T-cell nTPM: 306.8
Samples: 6
Max nTPM: 347.0
Min nTPM: 228.5
P10809_1016
228.5
P10809_1031
343.7
P10809_1050
347.0
P10809_1069
315.8
P10809_1087
320.1
P10809_1110
285.8
T-reg nTPM: 397.2
Samples: 6
Max nTPM: 575.7
Min nTPM: 270.7
P10809_1018
270.7
P10809_1037
425.6
P10809_1056
575.7
P10809_1075
299.6
P10809_1094
385.0
P10809_1106
426.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
142.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 80.1
Samples: 4
Max nTPM: 93.4
Min nTPM: 58.5
RHH5202_R3573
58.5
RHH5230_R3602
80.2
RHH5259_R3631
93.4
RHH5288_R3660
88.4
Effector memory CD8 T-cell nTPM: 73.5
Samples: 4
Max nTPM: 105.2
Min nTPM: 55.0
RHH5203_R3574
70.7
RHH5231_R3603
63.2
RHH5260_R3632
105.2
RHH5289_R3661
55.0
MAIT T-cell nTPM: 74.7
Samples: 4
Max nTPM: 87.1
Min nTPM: 57.8
RHH5233_R3605
57.8
RHH5205_R3576
69.6
RHH5262_R3634
87.1
RHH5297_R3663
84.4
Memory CD4 T-cell TFH nTPM: 67.3
Samples: 4
Max nTPM: 96.3
Min nTPM: 46.8
RHH5300_R3666
67.0
RHH5236_R3608
96.3
RHH5265_R3637
46.8
RHH5208_R3579
59.1
Memory CD4 T-cell Th1 nTPM: 96.3
Samples: 4
Max nTPM: 134.7
Min nTPM: 35.5
RHH5210_R3581
35.5
RHH5302_R3668
134.7
RHH5238_R3610
115.4
RHH5267_R3639
99.6
Memory CD4 T-cell Th1/Th17 nTPM: 74.8
Samples: 4
Max nTPM: 84.9
Min nTPM: 65.8
RHH5303_R3669
84.9
RHH5211_R3582
65.8
RHH5239_R3611
78.4
RHH5268_R3640
69.9
Memory CD4 T-cell Th17 nTPM: 75.5
Samples: 4
Max nTPM: 103.2
Min nTPM: 55.1
RHH5304_R3670
103.2
RHH5212_R3583
55.1
RHH5240_R3612
62.8
RHH5269_R3641
80.7
Memory CD4 T-cell Th2 nTPM: 76.5
Samples: 4
Max nTPM: 89.3
Min nTPM: 61.8
RHH5305_R3671
89.3
RHH5213_R3584
85.9
RHH5241_R3613
61.8
RHH5270_R3642
68.8
Naive CD4 T-cell nTPM: 75.6
Samples: 4
Max nTPM: 86.0
Min nTPM: 60.0
RHH5306_R3672
86.0
RHH5214_R3585
79.2
RHH5242_R3614
60.0
RHH5271_R3643
77.0
Naive CD8 T-cell nTPM: 72.2
Samples: 4
Max nTPM: 87.1
Min nTPM: 56.9
RHH5201_R3572
56.9
RHH5229_R3601
87.1
RHH5258_R3630
68.7
RHH5287_R3659
76.0
Non-Vd2 gdTCR nTPM: 114.2
Samples: 4
Max nTPM: 134.9
Min nTPM: 97.4
RHH5235_R3607
103.8
RHH5264_R3636
134.9
RHH5207_R3578
97.4
RHH5299_R3665
120.6
T-reg nTPM: 75.7
Samples: 4
Max nTPM: 95.4
Min nTPM: 60.0
RHH5301_R3667
95.4
RHH5237_R3609
60.0
RHH5266_R3638
78.7
RHH5209_R3580
68.7
Terminal effector memory CD4 T-cell nTPM: 84.5
Samples: 2
Max nTPM: 90.5
Min nTPM: 78.5
RHH5243_R3615
90.5
RHH5272_R3644
78.5
Terminal effector memory CD8 T-cell nTPM: 142.3
Samples: 4
Max nTPM: 236.8
Min nTPM: 73.9
RHH5232_R3604
73.9
RHH5204_R3575
236.8
RHH5261_R3633
131.0
RHH5296_R3662
127.4
Vd2 gdTCR nTPM: 137.0
Samples: 4
Max nTPM: 214.7
Min nTPM: 83.6
RHH5234_R3606
83.6
RHH5206_R3577
214.7
RHH5263_R3635
101.7
RHH5298_R3664
148.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
