HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni
Consensus:22.2 nTPM
HPA Brain:103.3 nTPM
GTEx:22.2 nTPM
FANTOM5:149.1 Scaled Tags Per Million
Pig:33.9 nTPM
Mouse:25.3 nTPM
Allen mouse:9.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA073106
Glial cells Not detected
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 103.3
Sample id Sample description nTPM
Hippocampus
nTPM: 77.0
2621 Female, age 67, right hemisphere 97.7
2148 Female, age 91, left hemisphere 90.9
1855 Male, age 76, left hemisphere 75.6
1911 Female, age 85, right hemisphere 67.7
2529 Female, age 94, left hemisphere 66.4
1898 Male, age 80, left hemisphere 63.4
Dentate gyrus
nTPM: 78.9
2531 Female, age 67, both hemispheres 105.7
1927 Female, age 91, both hemispheres 93.8
2246 Female, age 85, both hemispheres 75.8
2530 Female, age 94, left hemisphere 73.2
2528 Male, age 74, both hemispheres 68.8
2010 Male, age 76, both hemispheres 56.1
Entorhinal gyrus
nTPM: 103.3
2613 Female, age 94, left hemisphere 144.6
2686 Male, age 75, right hemisphere 134.5
2764 Male, age 80, right hemisphere 101.8
1787 Male, age 76, left hemisphere 96.5
1938 Female, age 85, left hemisphere 87.8
2117 Female, age 91, right hemisphere 55.0
Hippocampus, CA1
nTPM: 78.7
2749 Male, age 80, left hemisphere 100.8
2527 Male, age 74, both hemispheres 88.0
2082 Female, age 91, right hemisphere 70.6
1873 Female, age 85, both hemispheres 67.9
2045 Male, age 76, both hemispheres 66.2
Hippocampus, CA2
nTPM: 74.4
2437 Female, age 94, left hemisphere 103.7
1892 Male, age 76, both hemispheres 80.8
2249 Male, age 74, both hemispheres 68.8
2113 Female, age 91, right hemisphere 68.0
1963 Male, age 80, left hemisphere 64.6
1940 Female, age 85, left hemisphere 60.6
Hippocampus, CA3
nTPM: 82.8
2620 Female, age 94, left hemisphere 107.5
2861 Female, age 67, both hemispheres 104.3
2137 Male, age 80, left hemisphere 93.2
1867 Male, age 76, both hemispheres 71.2
2436 Male, age 74, both hemispheres 66.1
1891 Female, age 85, both hemispheres 54.6
Parahippocampal cortex
nTPM: 95.4
2622 Female, age 67, right hemisphere 137.1
2693 Female, age 94, both hemispheres 122.9
2245 Female, age 91, both hemispheres 114.5
2250 Female, age 67, right hemisphere 99.4
1990 Female, age 91, right hemisphere 90.9
1850 Male, age 80, both hemispheres 80.2
1933 Female, age 85, both hemispheres 80.0
2532 Female, age 72, left hemisphere 78.6
2692 Male, age 74, both hemispheres 77.8
2018 Male, age 76, both hemispheres 72.6
Perirhinal gyrus
nTPM: 97.2
2521 Female, age 94, right hemisphere 113.7
1847 Female, age 91, left hemisphere 101.2
2848 Male, age 76, right hemisphere 97.1
1794 Male, age 80, right hemisphere 92.6
1841 Female, age 85, right hemisphere 81.4
Subiculum
nTPM: 70.7
2438 Female, age 94, left hemisphere 92.5
2619 Male, age 74, both hemispheres 85.2
1977 Female, age 85, both hemispheres 75.8
1901 Male, age 80, both hemispheres 60.7
2729 Female, age 91, right hemisphere 59.2
2042 Male, age 76, both hemispheres 50.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 22.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 22.2
Samples: 197

Max nTPM: 61.3
Min nTPM: 0.7
Std nTPM: 11.7
Median nTPM: 21.3
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 61.3
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 53.6
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 49.3
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 48.0
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 47.2
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 44.9
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 44.8
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 42.1
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 40.3
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 39.8
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 39.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 149.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 149.1
FF:10153-102I9 76 years, female 151.7
FF:10169-103B7 60 years, female 146.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 33.9
Pig sample Sample description nTPM
Subiculum
nTPM: 33.1
Samples: 4

Max nTPM: 42.4
Min nTPM: 24.6
Sample A Female 42.4
Sample B Female 27.5
Sample C Male 37.7
Sample D Male 24.6
Dorsal hippocampus
nTPM: 29.8
Samples: 4

Max nTPM: 35.9
Min nTPM: 24.2
Sample A Female 35.9
Sample B Female 33.1
Sample C Male 26.0
Sample D Male 24.2
Entorhinal cortex
nTPM: 32.9
Samples: 4

Max nTPM: 35.7
Min nTPM: 28.3
Sample A Female 35.7
Sample B Female 28.3
Sample C Male 33.3
Sample D Male 34.1
Ventral hippocampus
nTPM: 33.9
Samples: 4

Max nTPM: 44.0
Min nTPM: 25.4
Sample A Female 34.6
Sample B Female 25.4
Sample C Male 44.0
Sample D Male 31.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 25.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 25.3
Samples: 4

Max nTPM: 30.3
Min nTPM: 22.3
Sample A Male 24.7
Sample B Male 24.0
Sample C Female 22.3
Sample D Female 30.3
Hippocampal formation
nTPM: 21.9
Samples: 4

Max nTPM: 24.0
Min nTPM: 20.1
Sample A Male 20.1
Sample B Male 24.0
Sample C Female 21.4
Sample D Female 22.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.8
68798903 Antisense, RP_050217_01_E10, Mouse strain C57BL/6J (56 days, male) 9.8

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