HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:766.5 nTPM
HPA Brain:389.7 nTPM
GTEx:766.5 nTPM
FANTOM5:4.3 Scaled Tags Per Million
Pig:99.4 nTPM
Mouse:541.6 nTPM
Allen mouse:3.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA055259
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 389.7
Sample id Sample description nTPM
Hippocampus
nTPM: 377.2
2529 Female, age 94, left hemisphere 448.2
1898 Male, age 80, left hemisphere 414.9
2621 Female, age 67, right hemisphere 407.3
1911 Female, age 85, right hemisphere 351.0
2148 Female, age 91, left hemisphere 325.6
1855 Male, age 76, left hemisphere 316.1
Dentate gyrus
nTPM: 389.7
2530 Female, age 94, left hemisphere 475.4
2531 Female, age 67, both hemispheres 425.3
2010 Male, age 76, both hemispheres 423.6
2246 Female, age 85, both hemispheres 358.4
2528 Male, age 74, both hemispheres 346.4
1927 Female, age 91, both hemispheres 309.2
Entorhinal gyrus
nTPM: 361.8
2686 Male, age 75, right hemisphere 421.3
2117 Female, age 91, right hemisphere 405.4
1787 Male, age 76, left hemisphere 396.0
2764 Male, age 80, right hemisphere 349.6
1938 Female, age 85, left hemisphere 312.8
2613 Female, age 94, left hemisphere 285.5
Hippocampus, CA1
nTPM: 341.9
2082 Female, age 91, right hemisphere 362.8
2045 Male, age 76, both hemispheres 357.3
2527 Male, age 74, both hemispheres 343.8
1873 Female, age 85, both hemispheres 323.4
2749 Male, age 80, left hemisphere 322.0
Hippocampus, CA2
nTPM: 349.9
1963 Male, age 80, left hemisphere 368.1
2437 Female, age 94, left hemisphere 367.2
2249 Male, age 74, both hemispheres 357.4
1940 Female, age 85, left hemisphere 342.5
2113 Female, age 91, right hemisphere 340.7
1892 Male, age 76, both hemispheres 323.7
Hippocampus, CA3
nTPM: 365.1
2436 Male, age 74, both hemispheres 435.3
2861 Female, age 67, both hemispheres 410.8
1867 Male, age 76, both hemispheres 389.3
1891 Female, age 85, both hemispheres 335.1
2620 Female, age 94, left hemisphere 319.0
2137 Male, age 80, left hemisphere 301.1
Parahippocampal cortex
nTPM: 320.2
2018 Male, age 76, both hemispheres 446.7
2250 Female, age 67, right hemisphere 353.2
2245 Female, age 91, both hemispheres 343.0
1990 Female, age 91, right hemisphere 324.1
2532 Female, age 72, left hemisphere 324.0
2622 Female, age 67, right hemisphere 306.6
1850 Male, age 80, both hemispheres 298.7
1933 Female, age 85, both hemispheres 294.0
2692 Male, age 74, both hemispheres 286.4
2693 Female, age 94, both hemispheres 225.1
Perirhinal gyrus
nTPM: 327.2
1794 Male, age 80, right hemisphere 364.8
1841 Female, age 85, right hemisphere 340.1
1847 Female, age 91, left hemisphere 319.3
2848 Male, age 76, right hemisphere 313.3
2521 Female, age 94, right hemisphere 298.2
Subiculum
nTPM: 348.3
2042 Male, age 76, both hemispheres 397.5
1977 Female, age 85, both hemispheres 375.1
2438 Female, age 94, left hemisphere 340.5
2619 Male, age 74, both hemispheres 332.6
1901 Male, age 80, both hemispheres 329.1
2729 Female, age 91, right hemisphere 315.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 766.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 766.5
Samples: 197

Max nTPM: 1855.8
Min nTPM: 373.8
Std nTPM: 259.2
Median nTPM: 704.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 1855.8
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 1586.6
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 1565.6
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 1561.2
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 1441.8
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 1422.8
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 1405.2
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 1353.1
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 1351.1
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 1319.4
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 1259.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 4.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 4.3
FF:10169-103B7 60 years, female 6.2
FF:10153-102I9 76 years, female 2.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 99.4
Pig sample Sample description nTPM
Subiculum
nTPM: 81.1
Samples: 4

Max nTPM: 108.9
Min nTPM: 66.6
Sample A Female 108.9
Sample B Female 77.3
Sample C Male 71.7
Sample D Male 66.6
Dorsal hippocampus
nTPM: 99.4
Samples: 4

Max nTPM: 123.3
Min nTPM: 74.7
Sample A Female 123.3
Sample B Female 86.7
Sample C Male 113.0
Sample D Male 74.7
Entorhinal cortex
nTPM: 79.6
Samples: 4

Max nTPM: 91.1
Min nTPM: 64.0
Sample A Female 76.7
Sample B Female 86.5
Sample C Male 91.1
Sample D Male 64.0
Ventral hippocampus
nTPM: 91.4
Samples: 4

Max nTPM: 115.8
Min nTPM: 72.6
Sample A Female 85.5
Sample B Female 72.6
Sample C Male 115.8
Sample D Male 91.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 541.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 532.9
Samples: 4

Max nTPM: 583.2
Min nTPM: 503.8
Sample A Male 540.5
Sample B Male 503.9
Sample C Female 583.2
Sample D Female 503.8
Hippocampal formation
nTPM: 541.6
Samples: 4

Max nTPM: 601.9
Min nTPM: 513.7
Sample A Male 601.9
Sample B Male 513.7
Sample C Female 535.0
Sample D Female 515.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.6
678716 Antisense, RP_040914_02_G08, Mouse strain C57BL/6J (56 days, male) 3.6

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