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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
199.3
nTPM
GTEx:
199.3
nTPM
FANTOM5:
6.4
Scaled Tags Per Million
Pig:
40.6
nTPM
Mouse:
885.9
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
199.3
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 199.3
Samples: 105
Max nTPM: 515.5
Min nTPM: 37.2
Std nTPM: 111.0
Median nTPM: 0.0
352_1
62 years, male
515.5
218_1
71 years, female
499.7
353_1
82 years, female
496.8
354_1
81 years, female
464.2
356_1
87 years, female
447.7
319_1
81 years, male
437.2
355_1
70 years, female
424.1
351_1
91 years, male
410.5
163_1
78 years, male
393.5
452_1
88 years, female
390.1
320_1
89 years, female
389.7
321_1
62 years, female
372.7
350_1
84 years, female
361.7
349_1
83 years, male
343.0
386_1
76 years, male
323.7
377_1
82 years, female
319.7
172_1
72 years, female
282.2
243_1
75 years, male
280.2
293_1
68 years, female
277.7
295_1
61 years, female
273.8
506_1
65 years, male
272.6
251_1
78 years, male
267.9
394_1
75 years, female
266.5
376_1
75 years, female
253.2
503_1
68 years, male
250.3
292_1
71 years, male
249.5
322_1
76 years, male
249.2
335_1
73 years, female
244.8
318_1
68 years, male
243.2
447_1
81 years, male
237.0
99_1
64 years, male
235.4
177_1
74 years, male
232.5
6_1
73 years, female
221.8
237_1
82 years, male
221.7
286_1
68 years, female
218.9
389_1
86 years, female
218.1
406_1
79 years, male
216.3
425_1
59 years, female
216.1
379_1
60 years, male
209.6
317_1
60 years, male
209.1
153_1
70 years, female
206.1
384_1
83 years, male
202.5
189_1
76 years, male
200.5
291_1
76 years, male
199.8
2_1
77 years, female
199.4
405_1
91 years, male
197.3
404_1
82 years, female
195.0
517_1
88 years, male
186.9
173_1
67 years, male
184.9
115_1
83 years, male
183.5
4_1
88 years, female
181.4
348_1
84 years, male
176.8
35_1
74 years, female
175.7
17_1
71 years, male
175.6
480_1
63 years, male
174.2
375_1
74 years, female
173.5
137_1
83 years, male
172.9
316_1
62 years, male
168.2
347_1
72 years, male
167.2
526_1
61 years, male
161.8
41_1
94 years, female
161.5
145_1
84 years, male
161.0
264_1
73 years, female
154.9
229_1
69 years, female
154.8
265_1
87 years, male
153.5
18_1
88 years, male
153.4
246_1
77 years, male
152.9
396_1
62 years, male
152.6
120_1
70 years, female
150.6
254_1
77 years, female
149.1
468_1
89 years, male
149.1
311_1
78 years, male
145.2
126_1
63 years, male
137.3
9_1
66 years, female
135.8
109_1
81 years, female
132.9
217_1
76 years, male
132.2
518_1
75 years, female
129.2
307_1
66 years, female
115.4
42_1
85 years, male
115.1
139_1
64 years, female
111.4
266_1
85 years, male
111.2
288_1
66 years, female
109.0
324_1
76 years, male
104.8
314_1
67 years, male
102.8
315_1
62 years, female
100.6
119_1
70 years, female
98.8
162_1
79 years, female
97.1
499_1
55 years, female
96.3
117_1
61 years, male
95.8
142_1
61 years, female
94.3
81_1
67 years, male
80.0
495_1
57 years, female
79.9
308_1
70 years, female
79.4
32_1
67 years, male
75.3
313_1
79 years, female
74.0
415_1
77 years, female
71.4
89_1
63 years, male
71.1
43_1
64 years, female
67.3
466_1
57 years, female
66.3
414_1
84 years, female
59.1
501_1
88 years, male
52.0
149_1
88 years, male
48.4
490_1
67 years, female
45.5
491_1
89 years, female
40.0
413_1
59 years, female
37.2
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.