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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
456.1
nTPM
FANTOM5:
6.6
Scaled Tags Per Million
Pig:
107.5
nTPM
Allen mouse:
1.0
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
456.1
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 445.4
2090
Male, age 80, both hemispheres
467.3
2188
Female, age 91, both hemispheres
466.9
2301
Female, age 85, both hemispheres
448.7
1984
Male, age 76, both hemispheres
398.6
Dorsal cochlear nucleus nTPM: 434.5
2187
Female, age 91, both hemispheres
476.1
2378
Male, age 80, both hemispheres
469.6
2802
Male, age 74, right hemisphere
439.9
2370
Male, age 61, both hemispheres
435.0
2058
Male, age 76, both hemispheres
352.0
Dorsal tegmental nucleus nTPM: 445.2
2358
Male, age 61, both hemispheres
484.6
2326
Male, age 74, both hemispheres
479.0
2083
Male, age 80, both hemispheres
451.4
1936
Male, age 76, left hemisphere
366.0
Dorsolateral tegmental area nTPM: 426.7
2337
Male, age 61, both hemispheres
542.8
2654
Male, age 80, both hemispheres
483.7
2360
Male, age 74, both hemispheres
406.1
2751
Female, age 85, both hemispheres
370.6
2141
Male, age 76, both hemispheres
330.6
Kolliker-Fuse nucleus nTPM: 453.3
2315
Male, age 76, right hemisphere
523.2
2793
Female, age 91, left hemisphere
425.2
2163
Male, age 80, both hemispheres
411.4
Lateral lemniscal nuclei nTPM: 383.2
2169
Male, age 76, both hemispheres
410.4
2746
Female, age 85, left hemisphere
408.4
2320
Female, age 91, left hemisphere
403.4
2036
Male, age 80, both hemispheres
350.3
2453
Male, age 74, right hemisphere
343.4
Lateral parabrachial nucleus nTPM: 450.4
2013
Male, age 80, both hemispheres
505.1
2792
Male, age 76, both hemispheres
480.9
2139
Female, age 85, right hemisphere
446.7
2790
Male, age 61, both hemispheres
368.8
Lateral vestibular nucleus nTPM: 456.1
2311
Male, age 80, both hemispheres
535.1
2184
Male, age 76, both hemispheres
377.1
Locus coeruleus nTPM: 363.0
2123
Female, age 91, both hemispheres
423.6
2162
Male, age 80, both hemispheres
407.0
2720
Male, age 74, both hemispheres
403.8
2317
Female, age 72, unknown
391.5
1980
Male, age 76, both hemispheres
355.0
2014
Male, age 55, unknown
331.5
2788
Male, age 74, unknown
229.0
Medial parabrachial nucleus nTPM: 416.2
2170
Female, age 91, both hemispheres
521.4
2156
Male, age 61, both hemispheres
408.5
2854
Male, age 80, both hemispheres
403.7
2463
Female, age 85, right hemisphere
390.1
2786
Male, age 76, both hemispheres
357.2
Medial periolivary nuclei nTPM: 379.7
2063
Male, age 76, both hemispheres
434.5
2458
Female, age 91, both hemispheres
390.2
2081
Male, age 80, both hemispheres
387.5
2171
Female, age 85, both hemispheres
371.2
2791
Male, age 74, right hemisphere
315.2
Motor facial nucleus nTPM: 370.4
2795
Female, age 91, both hemispheres
428.8
2062
Male, age 76, both hemispheres
412.1
2365
Male, age 74, right hemisphere
369.2
2697
Female, age 85, both hemispheres
363.0
2126
Male, age 61, both hemispheres
344.9
2327
Male, age 80, both hemispheres
304.3
Motor trigeminal nucleus nTPM: 393.1
2335
Male, age 61, both hemispheres
447.1
2321
Female, age 91, both hemispheres
414.6
2560
Male, age 74, both hemispheres
407.3
2309
Male, age 76, both hemispheres
372.1
2079
Male, age 80, both hemispheres
324.3
Nuclei of the trapezoid body nTPM: 388.5
1983
Male, age 76, both hemispheres
487.7
2735
Female, age 85, both hemispheres
375.0
2368
Female, age 91, both hemispheres
367.8
2166
Male, age 80, both hemispheres
364.1
2159
Male, age 61, both hemispheres
348.0
Nucleus raphe magnus nTPM: 375.4
2051
Male, age 76, both hemispheres
399.5
2172
Female, age 85, both hemispheres
387.3
2459
Female, age 91, both hemispheres
386.2
2328
Male, age 80, both hemispheres
368.1
2160
Male, age 61, both hemispheres
357.0
2455
Male, age 74, both hemispheres
354.5
Paramedian reticular nucleus nTPM: 360.5
2057
Male, age 80, both hemispheres
389.9
2313
Male, age 61, both hemispheres
385.1
2050
Female, age 85, both hemispheres
340.4
2052
Male, age 76, both hemispheres
326.8
Pedunculopontine tegmental nucleus nTPM: 386.7
2334
Male, age 80, both hemispheres
451.6
2338
Male, age 61, both hemispheres
408.2
1921
Female, age 85, both hemispheres
300.3
Pontine nuclei nTPM: 412.4
2787
Female, age 85, both hemispheres
511.3
2319
Female, age 91, both hemispheres
457.8
1968
Male, age 76, left hemisphere
432.9
1863
Male, age 55, unknown
418.5
2109
Female, age 72, unknown
391.5
2115
Male, age 80, left hemisphere
386.3
2454
Male, age 74, left hemisphere
365.9
2727
Male, age 61, right hemisphere
335.4
Pontine raphe nucleus nTPM: 364.2
2122
Female, age 85, midline
382.1
2853
Male, age 76, midline
346.4
Posteroventral cochlear nucleus nTPM: 430.0
2371
Male, age 61, both hemispheres
473.8
2135
Female, age 91, both hemispheres
451.9
2341
Male, age 80, both hemispheres
440.5
2070
Male, age 76, both hemispheres
418.7
2752
Female, age 85, both hemispheres
365.1
Principal sensory trigeminal nucleus nTPM: 369.7
2324
Male, age 76, both hemispheres
403.6
2158
Male, age 61, both hemispheres
397.6
2367
Female, age 91, left hemisphere
388.4
2008
Male, age 80, left hemisphere
289.0
Reticular pontine nucleus, caudal nTPM: 393.6
2092
Male, age 76, both hemispheres
437.0
2559
Male, age 74, both hemispheres
418.9
2457
Female, age 91, both hemispheres
381.4
2332
Male, age 80, right hemisphere
337.2
Reticular pontine nucleus, oral nTPM: 379.6
2366
Female, age 91, both hemispheres
441.1
2167
Male, age 76, both hemispheres
406.1
1939
Male, age 80, both hemispheres
377.6
2361
Male, age 74, both hemispheres
337.1
2012
Female, age 85, both hemispheres
336.0
Reticulotegmental nucleus nTPM: 397.8
2452
Male, age 74, both hemispheres
465.2
2322
Female, age 91, both hemispheres
395.3
2333
Male, age 80, both hemispheres
376.8
2325
Male, age 76, both hemispheres
353.8
Spinal trigeminal nucleus, oral nTPM: 388.5
2164
Male, age 80, both hemispheres
427.3
1978
Male, age 76, both hemispheres
390.6
2737
Female, age 85, both hemispheres
347.6
Subcoeruleus area nTPM: 394.4
2451
Male, age 74, both hemispheres
520.2
2323
Female, age 91, left hemisphere
391.2
2369
Female, age 85, left hemisphere
363.9
1958
Male, age 80, both hemispheres
353.8
2089
Male, age 76, left hemisphere
343.0
Superior olive nTPM: 372.5
2020
Male, age 76, both hemispheres
406.0
2561
Female, age 91, both hemispheres
398.5
2364
Male, age 74, right hemisphere
361.4
2329
Male, age 80, right hemisphere
358.9
1875
Female, age 85, both hemispheres
337.9
Ventral periolivary nuclei nTPM: 371.9
2023
Male, age 76, both hemispheres
412.7
2165
Male, age 80, both hemispheres
373.6
2794
Female, age 91, left hemisphere
364.4
2130
Female, age 85, both hemispheres
336.8
Ventrolateral tegmental area, A5 NE cell group nTPM: 387.5
2161
Male, age 80, both hemispheres
445.5
2456
Female, age 91, both hemispheres
399.6
1959
Male, age 76, both hemispheres
387.9
2359
Male, age 61, both hemispheres
385.8
2840
Female, age 85, both hemispheres
366.8
2449
Male, age 74, both hemispheres
339.4
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
107.5
Pig sample
Sample description
nTPM
Pons nTPM: 107.5
Samples: 4
Max nTPM: 129.4
Min nTPM: 77.4
Sample A
Female
103.4
Sample B
Female
77.4
Sample C
Male
119.8
Sample D
Male
129.4
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
