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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
147.6
nTPM
Monaco:
84.6
nTPM
Schmiedel:
103.2
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
147.6
HPA sample
nTPM
gdT-cell nTPM: 100.8
Samples: 6
Max nTPM: 132.7
Min nTPM: 70.7
P10809_1007
92.6
P10809_1022
132.7
P10809_1041
119.2
P10809_1060
70.7
P10809_1077
95.4
P10809_1098
94.4
MAIT T-cell nTPM: 142.9
Samples: 6
Max nTPM: 175.7
Min nTPM: 92.7
P10809_1006
92.7
P10809_1024
175.7
P10809_1043
153.3
P10809_1062
136.7
P10809_1083
130.6
P10809_1097
168.5
Memory CD4 T-cell nTPM: 136.3
Samples: 6
Max nTPM: 195.9
Min nTPM: 96.5
P10809_1014
96.5
P10809_1026
195.9
P10809_1045
155.5
P10809_1064
126.3
P10809_1086
128.1
P10809_1113
115.7
Memory CD8 T-cell nTPM: 116.3
Samples: 5
Max nTPM: 150.5
Min nTPM: 100.6
P10809_1012
100.6
P10809_1027
123.9
P10809_1046
150.5
P10809_1065
101.4
P10809_1111
105.1
Naive CD4 T-cell nTPM: 101.3
Samples: 6
Max nTPM: 143.8
Min nTPM: 68.2
P10809_1015
68.2
P10809_1030
119.7
P10809_1049
143.8
P10809_1068
95.2
P10809_1085
87.2
P10809_1112
93.7
Naive CD8 T-cell nTPM: 102.9
Samples: 6
Max nTPM: 142.2
Min nTPM: 76.9
P10809_1016
76.9
P10809_1031
142.2
P10809_1050
102.0
P10809_1069
106.0
P10809_1087
98.7
P10809_1110
91.8
T-reg nTPM: 147.5
Samples: 6
Max nTPM: 238.2
Min nTPM: 84.7
P10809_1018
84.7
P10809_1037
174.9
P10809_1056
238.2
P10809_1075
141.2
P10809_1094
112.7
P10809_1106
133.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
84.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 60.8
Samples: 4
Max nTPM: 93.4
Min nTPM: 43.2
RHH5202_R3573
47.2
RHH5230_R3602
59.5
RHH5259_R3631
43.2
RHH5288_R3660
93.4
Effector memory CD8 T-cell nTPM: 39.4
Samples: 4
Max nTPM: 50.2
Min nTPM: 22.9
RHH5203_R3574
41.0
RHH5231_R3603
50.2
RHH5260_R3632
43.3
RHH5289_R3661
22.9
MAIT T-cell nTPM: 74.5
Samples: 4
Max nTPM: 123.8
Min nTPM: 52.5
RHH5233_R3605
67.7
RHH5205_R3576
52.5
RHH5262_R3634
54.1
RHH5297_R3663
123.8
Memory CD4 T-cell TFH nTPM: 58.8
Samples: 4
Max nTPM: 90.7
Min nTPM: 28.6
RHH5300_R3666
80.8
RHH5236_R3608
90.7
RHH5265_R3637
35.2
RHH5208_R3579
28.6
Memory CD4 T-cell Th1 nTPM: 72.7
Samples: 4
Max nTPM: 120.1
Min nTPM: 43.4
RHH5210_R3581
70.0
RHH5302_R3668
120.1
RHH5238_R3610
57.2
RHH5267_R3639
43.4
Memory CD4 T-cell Th1/Th17 nTPM: 71.9
Samples: 4
Max nTPM: 90.8
Min nTPM: 40.7
RHH5303_R3669
90.8
RHH5211_R3582
83.2
RHH5239_R3611
40.7
RHH5268_R3640
73.0
Memory CD4 T-cell Th17 nTPM: 44.2
Samples: 4
Max nTPM: 59.0
Min nTPM: 26.9
RHH5304_R3670
54.8
RHH5212_R3583
59.0
RHH5240_R3612
26.9
RHH5269_R3641
36.0
Memory CD4 T-cell Th2 nTPM: 54.8
Samples: 4
Max nTPM: 75.7
Min nTPM: 32.1
RHH5305_R3671
51.2
RHH5213_R3584
60.2
RHH5241_R3613
75.7
RHH5270_R3642
32.1
Naive CD4 T-cell nTPM: 65.2
Samples: 4
Max nTPM: 89.1
Min nTPM: 43.2
RHH5306_R3672
81.4
RHH5214_R3585
89.1
RHH5242_R3614
47.2
RHH5271_R3643
43.2
Naive CD8 T-cell nTPM: 39.0
Samples: 4
Max nTPM: 54.3
Min nTPM: 24.4
RHH5201_R3572
24.4
RHH5229_R3601
39.7
RHH5258_R3630
54.3
RHH5287_R3659
37.4
Non-Vd2 gdTCR nTPM: 57.1
Samples: 4
Max nTPM: 85.2
Min nTPM: 41.5
RHH5235_R3607
42.9
RHH5264_R3636
58.9
RHH5207_R3578
41.5
RHH5299_R3665
85.2
T-reg nTPM: 65.4
Samples: 4
Max nTPM: 97.2
Min nTPM: 41.1
RHH5301_R3667
97.2
RHH5237_R3609
74.0
RHH5266_R3638
41.1
RHH5209_R3580
49.2
Terminal effector memory CD4 T-cell nTPM: 45.6
Samples: 2
Max nTPM: 55.5
Min nTPM: 35.6
RHH5243_R3615
35.6
RHH5272_R3644
55.5
Terminal effector memory CD8 T-cell nTPM: 61.4
Samples: 4
Max nTPM: 101.1
Min nTPM: 43.7
RHH5232_R3604
46.6
RHH5204_R3575
101.1
RHH5261_R3633
43.7
RHH5296_R3662
54.3
Vd2 gdTCR nTPM: 84.6
Samples: 4
Max nTPM: 140.8
Min nTPM: 41.8
RHH5234_R3606
59.5
RHH5206_R3577
96.4
RHH5263_R3635
41.8
RHH5298_R3664
140.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
