HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:80.5 nTPM
HPA Brain:113.2 nTPM
GTEx:80.5 nTPM
FANTOM5:64.6 Scaled Tags Per Million
Pig:27.4 nTPM
Mouse:40.7 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA057236
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 113.2
Sample id Sample description nTPM
Hippocampus
nTPM: 99.9
2529 Female, age 94, left hemisphere 109.3
2148 Female, age 91, left hemisphere 107.5
1898 Male, age 80, left hemisphere 106.2
1911 Female, age 85, right hemisphere 100.6
2621 Female, age 67, right hemisphere 91.7
1855 Male, age 76, left hemisphere 83.9
Dentate gyrus
nTPM: 98.6
2530 Female, age 94, left hemisphere 112.0
1927 Female, age 91, both hemispheres 107.5
2528 Male, age 74, both hemispheres 101.5
2531 Female, age 67, both hemispheres 93.0
2010 Male, age 76, both hemispheres 89.0
2246 Female, age 85, both hemispheres 88.8
Entorhinal gyrus
nTPM: 109.9
2117 Female, age 91, right hemisphere 127.8
2686 Male, age 75, right hemisphere 119.8
1938 Female, age 85, left hemisphere 117.5
2764 Male, age 80, right hemisphere 107.3
1787 Male, age 76, left hemisphere 94.4
2613 Female, age 94, left hemisphere 92.7
Hippocampus, CA1
nTPM: 97.2
1873 Female, age 85, both hemispheres 103.7
2527 Male, age 74, both hemispheres 99.0
2082 Female, age 91, right hemisphere 95.7
2045 Male, age 76, both hemispheres 94.7
2749 Male, age 80, left hemisphere 92.8
Hippocampus, CA2
nTPM: 101.6
1963 Male, age 80, left hemisphere 120.0
2113 Female, age 91, right hemisphere 105.7
2437 Female, age 94, left hemisphere 99.8
1940 Female, age 85, left hemisphere 95.7
2249 Male, age 74, both hemispheres 94.3
1892 Male, age 76, both hemispheres 93.9
Hippocampus, CA3
nTPM: 93.4
1891 Female, age 85, both hemispheres 112.6
2137 Male, age 80, left hemisphere 98.1
2861 Female, age 67, both hemispheres 90.7
1867 Male, age 76, both hemispheres 90.0
2436 Male, age 74, both hemispheres 85.5
2620 Female, age 94, left hemisphere 83.6
Parahippocampal cortex
nTPM: 104.0
1850 Male, age 80, both hemispheres 127.0
1990 Female, age 91, right hemisphere 113.5
1933 Female, age 85, both hemispheres 110.5
2692 Male, age 74, both hemispheres 104.9
2250 Female, age 67, right hemisphere 100.2
2018 Male, age 76, both hemispheres 99.2
2245 Female, age 91, both hemispheres 98.7
2693 Female, age 94, both hemispheres 98.0
2532 Female, age 72, left hemisphere 97.8
2622 Female, age 67, right hemisphere 89.9
Perirhinal gyrus
nTPM: 113.2
1841 Female, age 85, right hemisphere 126.9
1794 Male, age 80, right hemisphere 123.1
2848 Male, age 76, right hemisphere 114.2
1847 Female, age 91, left hemisphere 112.5
2521 Female, age 94, right hemisphere 89.4
Subiculum
nTPM: 100.3
2729 Female, age 91, right hemisphere 112.2
1977 Female, age 85, both hemispheres 103.6
2438 Female, age 94, left hemisphere 97.7
2042 Male, age 76, both hemispheres 97.3
1901 Male, age 80, both hemispheres 95.9
2619 Male, age 74, both hemispheres 95.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 80.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 80.5
Samples: 197

Max nTPM: 137.6
Min nTPM: 52.5
Std nTPM: 16.3
Median nTPM: 79.2
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 137.6
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 136.6
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 129.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 123.9
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 123.8
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 118.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 116.9
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 113.6
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 110.5
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 110.3
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 109.6
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 64.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 64.6
FF:10153-102I9 76 years, female 77.4
FF:10169-103B7 60 years, female 51.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 27.4
Pig sample Sample description nTPM
Subiculum
nTPM: 27.4
Samples: 4

Max nTPM: 29.5
Min nTPM: 25.9
Sample A Female 27.5
Sample B Female 29.5
Sample C Male 25.9
Sample D Male 26.7
Dorsal hippocampus
nTPM: 26.8
Samples: 4

Max nTPM: 28.4
Min nTPM: 23.9
Sample A Female 27.4
Sample B Female 23.9
Sample C Male 27.6
Sample D Male 28.4
Entorhinal cortex
nTPM: 26.4
Samples: 4

Max nTPM: 29.4
Min nTPM: 22.6
Sample A Female 22.6
Sample B Female 29.4
Sample C Male 27.3
Sample D Male 26.2
Ventral hippocampus
nTPM: 26.7
Samples: 4

Max nTPM: 31.0
Min nTPM: 23.7
Sample A Female 27.9
Sample B Female 31.0
Sample C Male 24.2
Sample D Male 23.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 40.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 40.1
Samples: 4

Max nTPM: 46.1
Min nTPM: 36.9
Sample A Male 38.1
Sample B Male 36.9
Sample C Female 46.1
Sample D Female 39.3
Hippocampal formation
nTPM: 40.7
Samples: 4

Max nTPM: 47.3
Min nTPM: 34.2
Sample A Male 42.8
Sample B Male 34.2
Sample C Female 47.3
Sample D Female 38.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
74821957 Antisense, RP_060321_02_F04, Mouse strain C57BL/6J (56 days, male) 0.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org