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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
124.1
nTPM
Monaco:
98.3
nTPM
Schmiedel:
120.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
124.1
HPA sample
nTPM
gdT-cell nTPM: 71.8
Samples: 6
Max nTPM: 94.9
Min nTPM: 44.7
P10809_1007
73.4
P10809_1022
54.0
P10809_1041
44.7
P10809_1060
75.4
P10809_1077
94.9
P10809_1098
88.6
MAIT T-cell nTPM: 108.0
Samples: 6
Max nTPM: 152.5
Min nTPM: 66.9
P10809_1006
82.0
P10809_1024
113.1
P10809_1043
66.9
P10809_1062
102.9
P10809_1083
130.4
P10809_1097
152.5
Memory CD4 T-cell nTPM: 114.2
Samples: 6
Max nTPM: 140.5
Min nTPM: 74.1
P10809_1014
115.4
P10809_1026
95.4
P10809_1045
74.1
P10809_1064
130.1
P10809_1086
140.5
P10809_1113
129.4
Memory CD8 T-cell nTPM: 98.9
Samples: 5
Max nTPM: 132.3
Min nTPM: 56.4
P10809_1012
88.8
P10809_1027
113.8
P10809_1046
56.4
P10809_1065
103.2
P10809_1111
132.3
Naive CD4 T-cell nTPM: 101.4
Samples: 6
Max nTPM: 142.9
Min nTPM: 59.8
P10809_1015
142.9
P10809_1030
80.6
P10809_1049
59.8
P10809_1068
107.9
P10809_1085
108.5
P10809_1112
108.8
Naive CD8 T-cell nTPM: 114.1
Samples: 6
Max nTPM: 130.1
Min nTPM: 81.9
P10809_1016
124.5
P10809_1031
127.7
P10809_1050
81.9
P10809_1069
106.3
P10809_1087
130.1
P10809_1110
113.9
T-reg nTPM: 124.1
Samples: 6
Max nTPM: 147.7
Min nTPM: 93.6
P10809_1018
120.0
P10809_1037
146.6
P10809_1056
93.6
P10809_1075
147.7
P10809_1094
104.2
P10809_1106
132.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
98.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 71.5
Samples: 4
Max nTPM: 90.6
Min nTPM: 47.2
RHH5202_R3573
47.2
RHH5230_R3602
59.0
RHH5259_R3631
89.2
RHH5288_R3660
90.6
Effector memory CD8 T-cell nTPM: 53.5
Samples: 4
Max nTPM: 79.6
Min nTPM: 32.5
RHH5203_R3574
61.4
RHH5231_R3603
32.5
RHH5260_R3632
79.6
RHH5289_R3661
40.5
MAIT T-cell nTPM: 76.5
Samples: 4
Max nTPM: 91.7
Min nTPM: 57.9
RHH5233_R3605
57.9
RHH5205_R3576
80.1
RHH5262_R3634
76.3
RHH5297_R3663
91.7
Memory CD4 T-cell TFH nTPM: 69.9
Samples: 4
Max nTPM: 98.5
Min nTPM: 58.5
RHH5300_R3666
63.4
RHH5236_R3608
98.5
RHH5265_R3637
58.5
RHH5208_R3579
59.0
Memory CD4 T-cell Th1 nTPM: 85.3
Samples: 4
Max nTPM: 111.8
Min nTPM: 49.6
RHH5210_R3581
49.6
RHH5302_R3668
111.8
RHH5238_R3610
102.9
RHH5267_R3639
76.8
Memory CD4 T-cell Th1/Th17 nTPM: 74.0
Samples: 4
Max nTPM: 102.1
Min nTPM: 44.2
RHH5303_R3669
72.6
RHH5211_R3582
76.9
RHH5239_R3611
44.2
RHH5268_R3640
102.1
Memory CD4 T-cell Th17 nTPM: 77.7
Samples: 4
Max nTPM: 103.2
Min nTPM: 46.3
RHH5304_R3670
103.2
RHH5212_R3583
46.3
RHH5240_R3612
81.2
RHH5269_R3641
80.0
Memory CD4 T-cell Th2 nTPM: 77.4
Samples: 4
Max nTPM: 115.6
Min nTPM: 55.9
RHH5305_R3671
115.6
RHH5213_R3584
78.5
RHH5241_R3613
55.9
RHH5270_R3642
59.7
Naive CD4 T-cell nTPM: 97.8
Samples: 4
Max nTPM: 116.4
Min nTPM: 80.5
RHH5306_R3672
104.5
RHH5214_R3585
116.4
RHH5242_R3614
89.7
RHH5271_R3643
80.5
Naive CD8 T-cell nTPM: 77.6
Samples: 4
Max nTPM: 88.5
Min nTPM: 51.1
RHH5201_R3572
84.0
RHH5229_R3601
88.5
RHH5258_R3630
51.1
RHH5287_R3659
86.6
Non-Vd2 gdTCR nTPM: 77.2
Samples: 4
Max nTPM: 89.6
Min nTPM: 59.3
RHH5235_R3607
59.3
RHH5264_R3636
88.1
RHH5207_R3578
71.6
RHH5299_R3665
89.6
T-reg nTPM: 94.5
Samples: 4
Max nTPM: 98.0
Min nTPM: 91.7
RHH5301_R3667
94.9
RHH5237_R3609
91.7
RHH5266_R3638
98.0
RHH5209_R3580
93.5
Terminal effector memory CD4 T-cell nTPM: 56.0
Samples: 2
Max nTPM: 69.1
Min nTPM: 42.9
RHH5243_R3615
42.9
RHH5272_R3644
69.1
Terminal effector memory CD8 T-cell nTPM: 82.3
Samples: 4
Max nTPM: 152.7
Min nTPM: 47.8
RHH5232_R3604
47.8
RHH5204_R3575
152.7
RHH5261_R3633
70.7
RHH5296_R3662
58.0
Vd2 gdTCR nTPM: 98.3
Samples: 4
Max nTPM: 156.1
Min nTPM: 49.7
RHH5234_R3606
49.7
RHH5206_R3577
156.1
RHH5263_R3635
95.5
RHH5298_R3664
91.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
