HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:47.7 nTPM
HPA Brain:81.4 nTPM
GTEx:47.7 nTPM
FANTOM5:90.4 Scaled Tags Per Million
Pig:145.0 nTPM
Mouse:90.8 nTPM
Allen mouse:14.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA024432
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 81.4
Sample id Sample description nTPM
Hippocampus
nTPM: 72.6
1898 Male, age 80, left hemisphere 92.0
2621 Female, age 67, right hemisphere 74.6
1855 Male, age 76, left hemisphere 71.5
2529 Female, age 94, left hemisphere 70.6
1911 Female, age 85, right hemisphere 69.7
2148 Female, age 91, left hemisphere 57.5
Dentate gyrus
nTPM: 67.8
2010 Male, age 76, both hemispheres 79.6
1927 Female, age 91, both hemispheres 77.6
2246 Female, age 85, both hemispheres 69.0
2528 Male, age 74, both hemispheres 64.6
2530 Female, age 94, left hemisphere 62.3
2531 Female, age 67, both hemispheres 53.5
Entorhinal gyrus
nTPM: 70.2
1938 Female, age 85, left hemisphere 86.3
2764 Male, age 80, right hemisphere 73.6
2117 Female, age 91, right hemisphere 70.6
1787 Male, age 76, left hemisphere 66.6
2613 Female, age 94, left hemisphere 64.3
2686 Male, age 75, right hemisphere 59.8
Hippocampus, CA1
nTPM: 78.5
2749 Male, age 80, left hemisphere 104.5
1873 Female, age 85, both hemispheres 78.2
2527 Male, age 74, both hemispheres 76.0
2082 Female, age 91, right hemisphere 68.8
2045 Male, age 76, both hemispheres 65.2
Hippocampus, CA2
nTPM: 77.0
1892 Male, age 76, both hemispheres 93.7
2249 Male, age 74, both hemispheres 88.5
1963 Male, age 80, left hemisphere 78.4
1940 Female, age 85, left hemisphere 69.7
2113 Female, age 91, right hemisphere 69.6
2437 Female, age 94, left hemisphere 61.9
Hippocampus, CA3
nTPM: 73.4
2436 Male, age 74, both hemispheres 91.4
2137 Male, age 80, left hemisphere 88.3
1867 Male, age 76, both hemispheres 80.9
1891 Female, age 85, both hemispheres 72.5
2620 Female, age 94, left hemisphere 55.8
2861 Female, age 67, both hemispheres 51.3
Parahippocampal cortex
nTPM: 72.7
1850 Male, age 80, both hemispheres 92.1
1933 Female, age 85, both hemispheres 80.6
1990 Female, age 91, right hemisphere 76.7
2250 Female, age 67, right hemisphere 76.3
2245 Female, age 91, both hemispheres 71.5
2018 Male, age 76, both hemispheres 70.8
2693 Female, age 94, both hemispheres 68.4
2532 Female, age 72, left hemisphere 67.7
2692 Male, age 74, both hemispheres 65.3
2622 Female, age 67, right hemisphere 58.2
Perirhinal gyrus
nTPM: 81.4
1841 Female, age 85, right hemisphere 90.3
1847 Female, age 91, left hemisphere 89.4
1794 Male, age 80, right hemisphere 84.5
2521 Female, age 94, right hemisphere 76.4
2848 Male, age 76, right hemisphere 66.2
Subiculum
nTPM: 72.2
1901 Male, age 80, both hemispheres 80.5
2042 Male, age 76, both hemispheres 74.8
2438 Female, age 94, left hemisphere 73.9
1977 Female, age 85, both hemispheres 73.1
2619 Male, age 74, both hemispheres 68.4
2729 Female, age 91, right hemisphere 62.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 47.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 47.7
Samples: 197

Max nTPM: 77.3
Min nTPM: 30.3
Std nTPM: 7.8
Median nTPM: 46.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 77.3
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 73.3
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 70.0
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 68.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 66.9
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 66.5
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 63.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 62.0
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 61.7
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 61.6
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 61.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 90.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 90.4
FF:10169-103B7 60 years, female 97.6
FF:10153-102I9 76 years, female 83.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 145.0
Pig sample Sample description nTPM
Subiculum
nTPM: 142.3
Samples: 4

Max nTPM: 170.3
Min nTPM: 128.6
Sample A Female 170.3
Sample B Female 128.6
Sample C Male 130.8
Sample D Male 139.4
Dorsal hippocampus
nTPM: 145.0
Samples: 4

Max nTPM: 168.1
Min nTPM: 113.0
Sample A Female 163.3
Sample B Female 135.4
Sample C Male 168.1
Sample D Male 113.0
Entorhinal cortex
nTPM: 144.2
Samples: 4

Max nTPM: 168.4
Min nTPM: 118.1
Sample A Female 130.8
Sample B Female 168.4
Sample C Male 159.3
Sample D Male 118.1
Ventral hippocampus
nTPM: 124.9
Samples: 4

Max nTPM: 142.6
Min nTPM: 109.6
Sample A Female 142.6
Sample B Female 123.5
Sample C Male 109.6
Sample D Male 124.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 90.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 84.3
Samples: 4

Max nTPM: 88.8
Min nTPM: 81.3
Sample A Male 81.3
Sample B Male 85.8
Sample C Female 88.8
Sample D Female 81.3
Hippocampal formation
nTPM: 90.8
Samples: 4

Max nTPM: 91.8
Min nTPM: 90.3
Sample A Male 91.8
Sample B Male 90.8
Sample C Female 90.3
Sample D Female 90.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 14.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 14.2
68300890 Antisense, RP_041129_02_D02, Mouse strain C57BL/6J (56 days, male) 14.2

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