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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
118.6
nTPM
Monaco:
218.4
nTPM
Schmiedel:
81.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
118.6
HPA sample
nTPM
gdT-cell nTPM: 68.7
Samples: 6
Max nTPM: 81.7
Min nTPM: 55.2
P10809_1007
55.2
P10809_1022
79.3
P10809_1041
55.4
P10809_1060
73.9
P10809_1077
81.7
P10809_1098
66.7
MAIT T-cell nTPM: 85.2
Samples: 6
Max nTPM: 125.2
Min nTPM: 66.3
P10809_1006
80.0
P10809_1024
125.2
P10809_1043
66.3
P10809_1062
80.5
P10809_1083
82.2
P10809_1097
76.9
Memory CD4 T-cell nTPM: 82.1
Samples: 6
Max nTPM: 89.3
Min nTPM: 75.8
P10809_1014
77.2
P10809_1026
81.0
P10809_1045
85.4
P10809_1064
89.3
P10809_1086
83.7
P10809_1113
75.8
Memory CD8 T-cell nTPM: 80.6
Samples: 5
Max nTPM: 88.5
Min nTPM: 72.4
P10809_1012
81.7
P10809_1027
76.5
P10809_1046
72.4
P10809_1065
88.5
P10809_1111
83.7
Naive CD4 T-cell nTPM: 74.7
Samples: 6
Max nTPM: 83.1
Min nTPM: 62.4
P10809_1015
62.4
P10809_1030
78.4
P10809_1049
83.1
P10809_1068
83.0
P10809_1085
74.1
P10809_1112
67.1
Naive CD8 T-cell nTPM: 75.5
Samples: 6
Max nTPM: 90.7
Min nTPM: 58.6
P10809_1016
58.6
P10809_1031
90.7
P10809_1050
75.8
P10809_1069
80.2
P10809_1087
81.5
P10809_1110
65.9
T-reg nTPM: 118.6
Samples: 6
Max nTPM: 147.0
Min nTPM: 87.4
P10809_1018
87.4
P10809_1037
124.7
P10809_1056
147.0
P10809_1075
115.5
P10809_1094
120.8
P10809_1106
116.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
218.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 175.0
Samples: 4
Max nTPM: 220.2
Min nTPM: 145.9
RHH5202_R3573
184.8
RHH5230_R3602
220.2
RHH5259_R3631
145.9
RHH5288_R3660
149.2
Effector memory CD8 T-cell nTPM: 218.4
Samples: 4
Max nTPM: 239.4
Min nTPM: 197.3
RHH5203_R3574
197.3
RHH5231_R3603
206.4
RHH5260_R3632
239.4
RHH5289_R3661
230.5
MAIT T-cell nTPM: 172.0
Samples: 4
Max nTPM: 201.6
Min nTPM: 154.7
RHH5233_R3605
201.6
RHH5205_R3576
174.6
RHH5262_R3634
157.2
RHH5297_R3663
154.7
Memory CD4 T-cell TFH nTPM: 193.0
Samples: 4
Max nTPM: 271.8
Min nTPM: 144.2
RHH5300_R3666
144.2
RHH5236_R3608
271.8
RHH5265_R3637
163.1
RHH5208_R3579
192.8
Memory CD4 T-cell Th1 nTPM: 156.7
Samples: 4
Max nTPM: 167.0
Min nTPM: 148.0
RHH5210_R3581
161.2
RHH5302_R3668
150.7
RHH5238_R3610
167.0
RHH5267_R3639
148.0
Memory CD4 T-cell Th1/Th17 nTPM: 187.3
Samples: 4
Max nTPM: 243.4
Min nTPM: 155.9
RHH5303_R3669
171.1
RHH5211_R3582
243.4
RHH5239_R3611
178.9
RHH5268_R3640
155.9
Memory CD4 T-cell Th17 nTPM: 204.2
Samples: 4
Max nTPM: 276.0
Min nTPM: 139.0
RHH5304_R3670
189.8
RHH5212_R3583
212.0
RHH5240_R3612
276.0
RHH5269_R3641
139.0
Memory CD4 T-cell Th2 nTPM: 171.6
Samples: 4
Max nTPM: 208.0
Min nTPM: 146.7
RHH5305_R3671
150.9
RHH5213_R3584
208.0
RHH5241_R3613
180.7
RHH5270_R3642
146.7
Naive CD4 T-cell nTPM: 166.7
Samples: 4
Max nTPM: 192.0
Min nTPM: 126.2
RHH5306_R3672
126.2
RHH5214_R3585
192.0
RHH5242_R3614
189.6
RHH5271_R3643
159.1
Naive CD8 T-cell nTPM: 164.1
Samples: 4
Max nTPM: 174.4
Min nTPM: 137.6
RHH5201_R3572
172.3
RHH5229_R3601
174.4
RHH5258_R3630
172.1
RHH5287_R3659
137.6
Non-Vd2 gdTCR nTPM: 204.4
Samples: 4
Max nTPM: 229.1
Min nTPM: 142.1
RHH5235_R3607
227.3
RHH5264_R3636
229.1
RHH5207_R3578
218.9
RHH5299_R3665
142.1
T-reg nTPM: 188.0
Samples: 4
Max nTPM: 260.0
Min nTPM: 126.8
RHH5301_R3667
126.8
RHH5237_R3609
260.0
RHH5266_R3638
174.6
RHH5209_R3580
190.4
Terminal effector memory CD4 T-cell nTPM: 187.4
Samples: 2
Max nTPM: 192.5
Min nTPM: 182.2
RHH5243_R3615
192.5
RHH5272_R3644
182.2
Terminal effector memory CD8 T-cell nTPM: 187.5
Samples: 4
Max nTPM: 223.6
Min nTPM: 144.4
RHH5232_R3604
205.8
RHH5204_R3575
176.3
RHH5261_R3633
223.6
RHH5296_R3662
144.4
Vd2 gdTCR nTPM: 178.5
Samples: 4
Max nTPM: 231.4
Min nTPM: 126.5
RHH5234_R3606
162.9
RHH5206_R3577
193.1
RHH5263_R3635
231.4
RHH5298_R3664
126.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
