HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:72.7 nTPM
HPA Brain:136.7 nTPM
GTEx:72.7 nTPM
FANTOM5:80.6 Scaled Tags Per Million
Pig:113.2 nTPM
Mouse:229.2 nTPM
Allen mouse:8.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA069176Antibody CAB008372
Glial cells Not detectedLow
Neuronal cells Not detectedLow




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 136.7
Sample id Sample description nTPM
Hippocampus
nTPM: 58.2
1898 Male, age 80, left hemisphere 71.8
1855 Male, age 76, left hemisphere 65.8
2621 Female, age 67, right hemisphere 57.8
1911 Female, age 85, right hemisphere 55.4
2148 Female, age 91, left hemisphere 54.5
2529 Female, age 94, left hemisphere 44.0
Dentate gyrus
nTPM: 56.5
2246 Female, age 85, both hemispheres 68.1
1927 Female, age 91, both hemispheres 66.4
2530 Female, age 94, left hemisphere 57.8
2010 Male, age 76, both hemispheres 53.8
2531 Female, age 67, both hemispheres 48.2
2528 Male, age 74, both hemispheres 44.4
Entorhinal gyrus
nTPM: 112.1
2613 Female, age 94, left hemisphere 168.5
2764 Male, age 80, right hemisphere 128.0
1938 Female, age 85, left hemisphere 121.4
1787 Male, age 76, left hemisphere 109.6
2686 Male, age 75, right hemisphere 106.9
2117 Female, age 91, right hemisphere 38.4
Hippocampus, CA1
nTPM: 73.9
2749 Male, age 80, left hemisphere 108.6
2082 Female, age 91, right hemisphere 83.0
1873 Female, age 85, both hemispheres 70.2
2527 Male, age 74, both hemispheres 57.1
2045 Male, age 76, both hemispheres 50.4
Hippocampus, CA2
nTPM: 69.3
1940 Female, age 85, left hemisphere 101.1
1892 Male, age 76, both hemispheres 80.9
2437 Female, age 94, left hemisphere 64.3
1963 Male, age 80, left hemisphere 63.4
2113 Female, age 91, right hemisphere 61.5
2249 Male, age 74, both hemispheres 44.3
Hippocampus, CA3
nTPM: 63.5
2137 Male, age 80, left hemisphere 113.0
2861 Female, age 67, both hemispheres 65.6
1867 Male, age 76, both hemispheres 61.4
2436 Male, age 74, both hemispheres 50.5
2620 Female, age 94, left hemisphere 47.8
1891 Female, age 85, both hemispheres 43.0
Parahippocampal cortex
nTPM: 107.6
2622 Female, age 67, right hemisphere 144.2
1850 Male, age 80, both hemispheres 140.8
2532 Female, age 72, left hemisphere 128.7
1933 Female, age 85, both hemispheres 123.8
2693 Female, age 94, both hemispheres 113.5
2245 Female, age 91, both hemispheres 108.1
1990 Female, age 91, right hemisphere 94.6
2018 Male, age 76, both hemispheres 76.6
2692 Male, age 74, both hemispheres 73.8
2250 Female, age 67, right hemisphere 72.3
Perirhinal gyrus
nTPM: 136.7
1847 Female, age 91, left hemisphere 163.2
1794 Male, age 80, right hemisphere 155.1
1841 Female, age 85, right hemisphere 135.6
2848 Male, age 76, right hemisphere 118.3
2521 Female, age 94, right hemisphere 111.2
Subiculum
nTPM: 58.7
1977 Female, age 85, both hemispheres 86.0
1901 Male, age 80, both hemispheres 65.4
2619 Male, age 74, both hemispheres 55.6
2042 Male, age 76, both hemispheres 55.5
2438 Female, age 94, left hemisphere 51.2
2729 Female, age 91, right hemisphere 38.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 72.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 72.7
Samples: 197

Max nTPM: 218.3
Min nTPM: 2.6
Std nTPM: 52.3
Median nTPM: 62.8
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 218.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 215.7
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 209.2
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 207.6
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 199.1
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 197.5
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 193.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 193.5
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 192.7
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 191.5
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 184.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 80.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 80.6
FF:10169-103B7 60 years, female 103.8
FF:10153-102I9 76 years, female 57.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 113.2
Pig sample Sample description nTPM
Subiculum
nTPM: 74.4
Samples: 4

Max nTPM: 95.0
Min nTPM: 52.7
Sample A Female 95.0
Sample B Female 69.0
Sample C Male 52.7
Sample D Male 80.7
Dorsal hippocampus
nTPM: 24.8
Samples: 4

Max nTPM: 29.7
Min nTPM: 19.8
Sample A Female 26.9
Sample B Female 29.7
Sample C Male 22.6
Sample D Male 19.8
Entorhinal cortex
nTPM: 113.2
Samples: 4

Max nTPM: 125.5
Min nTPM: 99.3
Sample A Female 125.5
Sample B Female 99.3
Sample C Male 115.6
Sample D Male 112.4
Ventral hippocampus
nTPM: 27.4
Samples: 4

Max nTPM: 37.3
Min nTPM: 21.3
Sample A Female 28.3
Sample B Female 22.5
Sample C Male 37.3
Sample D Male 21.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 229.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 229.3
Samples: 4

Max nTPM: 279.1
Min nTPM: 177.3
Sample A Male 227.4
Sample B Male 279.1
Sample C Female 177.3
Sample D Female 233.2
Hippocampal formation
nTPM: 95.3
Samples: 4

Max nTPM: 129.8
Min nTPM: 76.3
Sample A Male 129.8
Sample B Male 80.3
Sample C Female 76.3
Sample D Female 94.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.9
2645 Antisense, RP_Baylor_253979, Mouse strain C57BL/6J (56 days, male) 8.9
2646 Antisense, RP_Baylor_253979, Mouse strain C57BL/6J (56 days, male) 7.7

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