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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
38.7
nTPM
Monaco:
132.4
nTPM
Schmiedel:
96.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
38.7
HPA sample
nTPM
gdT-cell nTPM: 24.3
Samples: 6
Max nTPM: 45.4
Min nTPM: 14.7
P10809_1007
15.4
P10809_1022
14.7
P10809_1041
27.0
P10809_1060
20.8
P10809_1077
22.6
P10809_1098
45.4
MAIT T-cell nTPM: 24.1
Samples: 6
Max nTPM: 34.6
Min nTPM: 11.4
P10809_1006
23.3
P10809_1024
19.9
P10809_1043
33.3
P10809_1062
22.1
P10809_1083
11.4
P10809_1097
34.6
Memory CD4 T-cell nTPM: 33.2
Samples: 6
Max nTPM: 61.8
Min nTPM: 24.7
P10809_1014
25.6
P10809_1026
24.7
P10809_1045
29.2
P10809_1064
31.5
P10809_1086
26.2
P10809_1113
61.8
Memory CD8 T-cell nTPM: 25.1
Samples: 5
Max nTPM: 51.3
Min nTPM: 13.4
P10809_1012
14.1
P10809_1027
21.4
P10809_1046
13.4
P10809_1065
25.3
P10809_1111
51.3
Naive CD4 T-cell nTPM: 24.2
Samples: 6
Max nTPM: 37.8
Min nTPM: 15.4
P10809_1015
18.7
P10809_1030
27.5
P10809_1049
17.8
P10809_1068
15.4
P10809_1085
28.1
P10809_1112
37.8
Naive CD8 T-cell nTPM: 28.2
Samples: 6
Max nTPM: 37.6
Min nTPM: 17.2
P10809_1016
17.2
P10809_1031
26.8
P10809_1050
28.3
P10809_1069
24.7
P10809_1087
34.5
P10809_1110
37.6
T-reg nTPM: 38.7
Samples: 6
Max nTPM: 66.4
Min nTPM: 21.3
P10809_1018
36.0
P10809_1037
24.7
P10809_1056
46.0
P10809_1075
21.3
P10809_1094
37.9
P10809_1106
66.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
132.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 96.3
Samples: 4
Max nTPM: 115.4
Min nTPM: 80.4
RHH5202_R3573
97.5
RHH5230_R3602
80.4
RHH5259_R3631
91.7
RHH5288_R3660
115.4
Effector memory CD8 T-cell nTPM: 114.6
Samples: 4
Max nTPM: 123.9
Min nTPM: 100.9
RHH5203_R3574
118.8
RHH5231_R3603
123.9
RHH5260_R3632
100.9
RHH5289_R3661
114.7
MAIT T-cell nTPM: 72.8
Samples: 4
Max nTPM: 86.8
Min nTPM: 61.4
RHH5233_R3605
75.6
RHH5205_R3576
61.4
RHH5262_R3634
86.8
RHH5297_R3663
67.3
Memory CD4 T-cell TFH nTPM: 125.2
Samples: 4
Max nTPM: 138.6
Min nTPM: 118.0
RHH5300_R3666
124.3
RHH5236_R3608
119.9
RHH5265_R3637
138.6
RHH5208_R3579
118.0
Memory CD4 T-cell Th1 nTPM: 107.6
Samples: 4
Max nTPM: 126.2
Min nTPM: 84.6
RHH5210_R3581
84.6
RHH5302_R3668
126.2
RHH5238_R3610
112.9
RHH5267_R3639
106.8
Memory CD4 T-cell Th1/Th17 nTPM: 90.3
Samples: 4
Max nTPM: 99.0
Min nTPM: 76.4
RHH5303_R3669
93.3
RHH5211_R3582
99.0
RHH5239_R3611
76.4
RHH5268_R3640
92.4
Memory CD4 T-cell Th17 nTPM: 112.5
Samples: 4
Max nTPM: 131.4
Min nTPM: 93.2
RHH5304_R3670
104.6
RHH5212_R3583
120.6
RHH5240_R3612
131.4
RHH5269_R3641
93.2
Memory CD4 T-cell Th2 nTPM: 132.4
Samples: 4
Max nTPM: 144.1
Min nTPM: 120.0
RHH5305_R3671
122.9
RHH5213_R3584
120.0
RHH5241_R3613
142.5
RHH5270_R3642
144.1
Naive CD4 T-cell nTPM: 90.5
Samples: 4
Max nTPM: 118.9
Min nTPM: 71.7
RHH5306_R3672
92.0
RHH5214_R3585
79.4
RHH5242_R3614
71.7
RHH5271_R3643
118.9
Naive CD8 T-cell nTPM: 79.7
Samples: 4
Max nTPM: 93.1
Min nTPM: 63.8
RHH5201_R3572
83.0
RHH5229_R3601
63.8
RHH5258_R3630
78.8
RHH5287_R3659
93.1
Non-Vd2 gdTCR nTPM: 81.7
Samples: 4
Max nTPM: 91.3
Min nTPM: 75.2
RHH5235_R3607
78.9
RHH5264_R3636
91.3
RHH5207_R3578
81.2
RHH5299_R3665
75.2
T-reg nTPM: 113.8
Samples: 4
Max nTPM: 127.6
Min nTPM: 102.4
RHH5301_R3667
112.7
RHH5237_R3609
127.6
RHH5266_R3638
112.4
RHH5209_R3580
102.4
Terminal effector memory CD4 T-cell nTPM: 85.4
Samples: 2
Max nTPM: 103.2
Min nTPM: 67.5
RHH5243_R3615
67.5
RHH5272_R3644
103.2
Terminal effector memory CD8 T-cell nTPM: 79.0
Samples: 4
Max nTPM: 86.2
Min nTPM: 67.0
RHH5232_R3604
86.2
RHH5204_R3575
67.0
RHH5261_R3633
77.9
RHH5296_R3662
84.9
Vd2 gdTCR nTPM: 79.2
Samples: 4
Max nTPM: 86.7
Min nTPM: 69.5
RHH5234_R3606
86.7
RHH5206_R3577
80.4
RHH5263_R3635
80.3
RHH5298_R3664
69.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
