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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
57.3
nTPM
Monaco:
17.3
nTPM
Schmiedel:
24.3
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
57.3
HPA sample
nTPM
gdT-cell nTPM: 31.4
Samples: 6
Max nTPM: 44.4
Min nTPM: 15.4
P10809_1007
28.9
P10809_1022
30.5
P10809_1041
37.5
P10809_1060
15.4
P10809_1077
31.5
P10809_1098
44.4
MAIT T-cell nTPM: 37.0
Samples: 6
Max nTPM: 59.4
Min nTPM: 22.1
P10809_1006
30.1
P10809_1024
22.1
P10809_1043
44.3
P10809_1062
22.9
P10809_1083
43.4
P10809_1097
59.4
Memory CD4 T-cell nTPM: 36.2
Samples: 6
Max nTPM: 51.8
Min nTPM: 18.5
P10809_1014
28.2
P10809_1026
51.8
P10809_1045
46.1
P10809_1064
46.7
P10809_1086
25.6
P10809_1113
18.5
Memory CD8 T-cell nTPM: 36.6
Samples: 5
Max nTPM: 54.4
Min nTPM: 30.1
P10809_1012
30.5
P10809_1027
34.4
P10809_1046
54.4
P10809_1065
30.1
P10809_1111
33.8
Naive CD4 T-cell nTPM: 21.4
Samples: 6
Max nTPM: 40.9
Min nTPM: 10.5
P10809_1015
10.5
P10809_1030
23.0
P10809_1049
40.9
P10809_1068
21.2
P10809_1085
18.4
P10809_1112
14.3
Naive CD8 T-cell nTPM: 22.3
Samples: 6
Max nTPM: 32.2
Min nTPM: 13.3
P10809_1016
14.6
P10809_1031
32.2
P10809_1050
29.5
P10809_1069
30.8
P10809_1087
13.3
P10809_1110
13.3
T-reg nTPM: 57.3
Samples: 6
Max nTPM: 167.1
Min nTPM: 21.7
P10809_1018
27.2
P10809_1037
38.5
P10809_1056
167.1
P10809_1075
25.0
P10809_1094
21.7
P10809_1106
64.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
17.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 11.5
Samples: 4
Max nTPM: 16.9
Min nTPM: 6.2
RHH5202_R3573
6.2
RHH5230_R3602
10.8
RHH5259_R3631
16.9
RHH5288_R3660
11.9
Effector memory CD8 T-cell nTPM: 10.6
Samples: 4
Max nTPM: 19.2
Min nTPM: 1.3
RHH5203_R3574
10.3
RHH5231_R3603
19.2
RHH5260_R3632
11.7
RHH5289_R3661
1.3
MAIT T-cell nTPM: 14.9
Samples: 4
Max nTPM: 18.0
Min nTPM: 10.3
RHH5233_R3605
18.0
RHH5205_R3576
10.3
RHH5262_R3634
14.8
RHH5297_R3663
16.3
Memory CD4 T-cell TFH nTPM: 16.6
Samples: 4
Max nTPM: 28.9
Min nTPM: 9.3
RHH5300_R3666
15.7
RHH5236_R3608
28.9
RHH5265_R3637
12.5
RHH5208_R3579
9.3
Memory CD4 T-cell Th1 nTPM: 10.9
Samples: 4
Max nTPM: 12.0
Min nTPM: 8.5
RHH5210_R3581
8.5
RHH5302_R3668
12.0
RHH5238_R3610
11.2
RHH5267_R3639
11.8
Memory CD4 T-cell Th1/Th17 nTPM: 14.7
Samples: 4
Max nTPM: 29.0
Min nTPM: 5.7
RHH5303_R3669
10.5
RHH5211_R3582
29.0
RHH5239_R3611
5.7
RHH5268_R3640
13.5
Memory CD4 T-cell Th17 nTPM: 13.3
Samples: 4
Max nTPM: 29.3
Min nTPM: 4.1
RHH5304_R3670
9.2
RHH5212_R3583
29.3
RHH5240_R3612
4.1
RHH5269_R3641
10.7
Memory CD4 T-cell Th2 nTPM: 12.0
Samples: 4
Max nTPM: 16.4
Min nTPM: 7.8
RHH5305_R3671
14.3
RHH5213_R3584
9.3
RHH5241_R3613
7.8
RHH5270_R3642
16.4
Naive CD4 T-cell nTPM: 11.0
Samples: 4
Max nTPM: 15.7
Min nTPM: 3.5
RHH5306_R3672
15.7
RHH5214_R3585
13.6
RHH5242_R3614
11.0
RHH5271_R3643
3.5
Naive CD8 T-cell nTPM: 6.9
Samples: 4
Max nTPM: 13.7
Min nTPM: 2.9
RHH5201_R3572
4.9
RHH5229_R3601
6.1
RHH5258_R3630
13.7
RHH5287_R3659
2.9
Non-Vd2 gdTCR nTPM: 15.5
Samples: 4
Max nTPM: 26.4
Min nTPM: 6.6
RHH5235_R3607
10.3
RHH5264_R3636
18.7
RHH5207_R3578
6.6
RHH5299_R3665
26.4
T-reg nTPM: 15.8
Samples: 4
Max nTPM: 25.6
Min nTPM: 7.3
RHH5301_R3667
21.4
RHH5237_R3609
25.6
RHH5266_R3638
8.8
RHH5209_R3580
7.3
Terminal effector memory CD4 T-cell nTPM: 12.9
Samples: 2
Max nTPM: 14.7
Min nTPM: 11.0
RHH5243_R3615
11.0
RHH5272_R3644
14.7
Terminal effector memory CD8 T-cell nTPM: 16.7
Samples: 4
Max nTPM: 21.1
Min nTPM: 8.0
RHH5232_R3604
8.0
RHH5204_R3575
21.1
RHH5261_R3633
18.2
RHH5296_R3662
19.3
Vd2 gdTCR nTPM: 17.3
Samples: 4
Max nTPM: 24.2
Min nTPM: 7.5
RHH5234_R3606
21.9
RHH5206_R3577
15.5
RHH5263_R3635
7.5
RHH5298_R3664
24.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
