HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:13.2 nTPM
HPA Brain:53.0 nTPM
GTEx:13.2 nTPM
FANTOM5:37.4 Scaled Tags Per Million
Pig:24.2 nTPM
Mouse:33.3 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA019689Antibody HPA073562
Glial cells Not detectedLow
Neuronal cells Not detectedLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 53.0
Sample id Sample description nTPM
Hippocampus
nTPM: 47.8
2148 Female, age 91, left hemisphere 61.4
2621 Female, age 67, right hemisphere 49.3
1855 Male, age 76, left hemisphere 46.2
1911 Female, age 85, right hemisphere 43.9
1898 Male, age 80, left hemisphere 43.1
2529 Female, age 94, left hemisphere 43.0
Dentate gyrus
nTPM: 48.6
2531 Female, age 67, both hemispheres 65.1
2528 Male, age 74, both hemispheres 56.7
2530 Female, age 94, left hemisphere 51.2
1927 Female, age 91, both hemispheres 45.0
2246 Female, age 85, both hemispheres 43.8
2010 Male, age 76, both hemispheres 29.6
Entorhinal gyrus
nTPM: 35.3
2613 Female, age 94, left hemisphere 41.3
2117 Female, age 91, right hemisphere 40.6
2686 Male, age 75, right hemisphere 39.7
2764 Male, age 80, right hemisphere 31.8
1938 Female, age 85, left hemisphere 30.6
1787 Male, age 76, left hemisphere 28.1
Hippocampus, CA1
nTPM: 42.8
1873 Female, age 85, both hemispheres 51.6
2527 Male, age 74, both hemispheres 46.5
2749 Male, age 80, left hemisphere 41.5
2045 Male, age 76, both hemispheres 40.7
2082 Female, age 91, right hemisphere 33.8
Hippocampus, CA2
nTPM: 38.6
1963 Male, age 80, left hemisphere 48.2
1940 Female, age 85, left hemisphere 37.5
2113 Female, age 91, right hemisphere 37.4
2437 Female, age 94, left hemisphere 37.0
2249 Male, age 74, both hemispheres 36.7
1892 Male, age 76, both hemispheres 35.0
Hippocampus, CA3
nTPM: 53.0
2620 Female, age 94, left hemisphere 93.8
2861 Female, age 67, both hemispheres 67.4
2137 Male, age 80, left hemisphere 45.4
2436 Male, age 74, both hemispheres 42.2
1891 Female, age 85, both hemispheres 41.5
1867 Male, age 76, both hemispheres 27.6
Parahippocampal cortex
nTPM: 30.4
2692 Male, age 74, both hemispheres 43.6
2245 Female, age 91, both hemispheres 37.6
2622 Female, age 67, right hemisphere 34.8
2693 Female, age 94, both hemispheres 30.8
2250 Female, age 67, right hemisphere 27.7
2018 Male, age 76, both hemispheres 27.1
1990 Female, age 91, right hemisphere 26.4
2532 Female, age 72, left hemisphere 26.4
1850 Male, age 80, both hemispheres 26.3
1933 Female, age 85, both hemispheres 23.5
Perirhinal gyrus
nTPM: 24.4
1794 Male, age 80, right hemisphere 28.2
2848 Male, age 76, right hemisphere 25.0
1847 Female, age 91, left hemisphere 24.0
1841 Female, age 85, right hemisphere 23.3
2521 Female, age 94, right hemisphere 21.5
Subiculum
nTPM: 35.2
2729 Female, age 91, right hemisphere 50.1
2619 Male, age 74, both hemispheres 39.2
2438 Female, age 94, left hemisphere 32.6
1901 Male, age 80, both hemispheres 31.7
2042 Male, age 76, both hemispheres 30.4
1977 Female, age 85, both hemispheres 27.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 13.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 13.2
Samples: 197

Max nTPM: 39.1
Min nTPM: 5.1
Std nTPM: 5.1
Median nTPM: 12.1
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 39.1
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 27.1
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 26.2
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 25.0
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 24.9
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 24.9
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 24.5
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 24.1
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 24.0
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 23.4
GTEX-NPJ7-0011-R1a-SM-3GACT 60-69 years, female 22.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 37.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 37.4
FF:10153-102I9 76 years, female 42.6
FF:10169-103B7 60 years, female 32.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 24.2
Pig sample Sample description nTPM
Subiculum
nTPM: 15.2
Samples: 4

Max nTPM: 17.4
Min nTPM: 13.1
Sample A Female 17.4
Sample B Female 15.0
Sample C Male 15.3
Sample D Male 13.1
Dorsal hippocampus
nTPM: 24.2
Samples: 4

Max nTPM: 27.2
Min nTPM: 16.3
Sample A Female 27.2
Sample B Female 26.7
Sample C Male 16.3
Sample D Male 26.6
Entorhinal cortex
nTPM: 13.3
Samples: 4

Max nTPM: 15.0
Min nTPM: 12.4
Sample A Female 15.0
Sample B Female 13.1
Sample C Male 12.8
Sample D Male 12.4
Ventral hippocampus
nTPM: 20.7
Samples: 4

Max nTPM: 25.7
Min nTPM: 16.1
Sample A Female 18.4
Sample B Female 16.1
Sample C Male 22.6
Sample D Male 25.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 33.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 23.2
Samples: 4

Max nTPM: 24.7
Min nTPM: 22.0
Sample A Male 22.0
Sample B Male 22.2
Sample C Female 24.7
Sample D Female 24.0
Hippocampal formation
nTPM: 33.3
Samples: 4

Max nTPM: 35.9
Min nTPM: 29.8
Sample A Male 29.8
Sample B Male 35.1
Sample C Female 35.9
Sample D Female 32.5

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