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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
25.9
nTPM
Monaco:
159.8
nTPM
Schmiedel:
32.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
25.9
HPA sample
nTPM
gdT-cell nTPM: 12.1
Samples: 6
Max nTPM: 14.0
Min nTPM: 9.0
P10809_1007
12.1
P10809_1022
13.0
P10809_1041
12.3
P10809_1060
12.4
P10809_1077
9.0
P10809_1098
14.0
MAIT T-cell nTPM: 20.4
Samples: 6
Max nTPM: 28.3
Min nTPM: 15.0
P10809_1006
28.3
P10809_1024
25.0
P10809_1043
15.0
P10809_1062
18.0
P10809_1083
19.7
P10809_1097
16.2
Memory CD4 T-cell nTPM: 16.3
Samples: 6
Max nTPM: 21.6
Min nTPM: 9.3
P10809_1014
20.7
P10809_1026
9.3
P10809_1045
14.7
P10809_1064
10.4
P10809_1086
21.6
P10809_1113
20.8
Memory CD8 T-cell nTPM: 15.2
Samples: 5
Max nTPM: 21.7
Min nTPM: 11.5
P10809_1012
21.7
P10809_1027
11.5
P10809_1046
12.0
P10809_1065
16.1
P10809_1111
14.7
Naive CD4 T-cell nTPM: 25.9
Samples: 6
Max nTPM: 34.8
Min nTPM: 16.7
P10809_1015
34.5
P10809_1030
17.0
P10809_1049
16.7
P10809_1068
28.3
P10809_1085
34.8
P10809_1112
23.9
Naive CD8 T-cell nTPM: 18.5
Samples: 6
Max nTPM: 28.4
Min nTPM: 13.4
P10809_1016
28.4
P10809_1031
19.9
P10809_1050
13.4
P10809_1069
16.5
P10809_1087
13.7
P10809_1110
18.9
T-reg nTPM: 16.4
Samples: 6
Max nTPM: 31.1
Min nTPM: 10.5
P10809_1018
13.8
P10809_1037
14.3
P10809_1056
12.2
P10809_1075
16.5
P10809_1094
31.1
P10809_1106
10.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
159.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 127.6
Samples: 4
Max nTPM: 145.3
Min nTPM: 88.7
RHH5202_R3573
145.3
RHH5230_R3602
143.3
RHH5259_R3631
88.7
RHH5288_R3660
133.1
Effector memory CD8 T-cell nTPM: 76.8
Samples: 4
Max nTPM: 105.1
Min nTPM: 53.5
RHH5203_R3574
105.1
RHH5231_R3603
53.5
RHH5260_R3632
61.0
RHH5289_R3661
87.4
MAIT T-cell nTPM: 132.8
Samples: 4
Max nTPM: 172.0
Min nTPM: 88.5
RHH5233_R3605
143.1
RHH5205_R3576
172.0
RHH5262_R3634
127.5
RHH5297_R3663
88.5
Memory CD4 T-cell TFH nTPM: 120.1
Samples: 4
Max nTPM: 166.5
Min nTPM: 96.5
RHH5300_R3666
105.6
RHH5236_R3608
96.5
RHH5265_R3637
111.8
RHH5208_R3579
166.5
Memory CD4 T-cell Th1 nTPM: 111.7
Samples: 4
Max nTPM: 153.4
Min nTPM: 91.5
RHH5210_R3581
153.4
RHH5302_R3668
91.5
RHH5238_R3610
109.7
RHH5267_R3639
92.0
Memory CD4 T-cell Th1/Th17 nTPM: 129.5
Samples: 4
Max nTPM: 185.8
Min nTPM: 82.0
RHH5303_R3669
134.6
RHH5211_R3582
115.5
RHH5239_R3611
185.8
RHH5268_R3640
82.0
Memory CD4 T-cell Th17 nTPM: 121.4
Samples: 4
Max nTPM: 134.1
Min nTPM: 112.9
RHH5304_R3670
118.7
RHH5212_R3583
112.9
RHH5240_R3612
134.1
RHH5269_R3641
119.7
Memory CD4 T-cell Th2 nTPM: 136.2
Samples: 4
Max nTPM: 152.8
Min nTPM: 111.3
RHH5305_R3671
111.3
RHH5213_R3584
152.8
RHH5241_R3613
138.3
RHH5270_R3642
142.2
Naive CD4 T-cell nTPM: 143.4
Samples: 4
Max nTPM: 154.5
Min nTPM: 135.3
RHH5306_R3672
154.5
RHH5214_R3585
135.3
RHH5242_R3614
145.3
RHH5271_R3643
138.4
Naive CD8 T-cell nTPM: 159.8
Samples: 4
Max nTPM: 218.9
Min nTPM: 105.9
RHH5201_R3572
218.9
RHH5229_R3601
105.9
RHH5258_R3630
126.3
RHH5287_R3659
188.1
Non-Vd2 gdTCR nTPM: 87.9
Samples: 4
Max nTPM: 127.9
Min nTPM: 50.0
RHH5235_R3607
85.9
RHH5264_R3636
87.6
RHH5207_R3578
127.9
RHH5299_R3665
50.0
T-reg nTPM: 100.0
Samples: 4
Max nTPM: 113.9
Min nTPM: 85.3
RHH5301_R3667
85.3
RHH5237_R3609
94.0
RHH5266_R3638
113.9
RHH5209_R3580
106.8
Terminal effector memory CD4 T-cell nTPM: 66.6
Samples: 2
Max nTPM: 84.0
Min nTPM: 49.1
RHH5243_R3615
49.1
RHH5272_R3644
84.0
Terminal effector memory CD8 T-cell nTPM: 51.6
Samples: 4
Max nTPM: 65.5
Min nTPM: 41.2
RHH5232_R3604
65.5
RHH5204_R3575
41.2
RHH5261_R3633
45.5
RHH5296_R3662
54.3
Vd2 gdTCR nTPM: 103.7
Samples: 4
Max nTPM: 113.2
Min nTPM: 91.6
RHH5234_R3606
102.5
RHH5206_R3577
91.6
RHH5263_R3635
113.2
RHH5298_R3664
107.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
