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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
167.2
nTPM
Monaco:
378.0
nTPM
Schmiedel:
237.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
167.2
HPA sample
nTPM
gdT-cell nTPM: 94.1
Samples: 6
Max nTPM: 104.3
Min nTPM: 70.5
P10809_1007
96.7
P10809_1022
104.1
P10809_1041
104.3
P10809_1060
88.3
P10809_1077
70.5
P10809_1098
100.8
MAIT T-cell nTPM: 118.5
Samples: 6
Max nTPM: 161.3
Min nTPM: 80.7
P10809_1006
161.3
P10809_1024
126.8
P10809_1043
80.7
P10809_1062
130.1
P10809_1083
88.0
P10809_1097
124.1
Memory CD4 T-cell nTPM: 122.4
Samples: 6
Max nTPM: 149.9
Min nTPM: 109.8
P10809_1014
149.9
P10809_1026
113.8
P10809_1045
123.1
P10809_1064
113.1
P10809_1086
109.8
P10809_1113
124.7
Memory CD8 T-cell nTPM: 114.8
Samples: 5
Max nTPM: 120.6
Min nTPM: 108.3
P10809_1012
120.6
P10809_1027
116.0
P10809_1046
108.3
P10809_1065
112.5
P10809_1111
116.4
Naive CD4 T-cell nTPM: 167.2
Samples: 6
Max nTPM: 215.5
Min nTPM: 139.9
P10809_1015
215.5
P10809_1030
157.7
P10809_1049
151.0
P10809_1068
179.5
P10809_1085
139.9
P10809_1112
159.7
Naive CD8 T-cell nTPM: 125.2
Samples: 6
Max nTPM: 163.1
Min nTPM: 99.9
P10809_1016
163.1
P10809_1031
115.1
P10809_1050
120.4
P10809_1069
141.3
P10809_1087
99.9
P10809_1110
111.1
T-reg nTPM: 108.0
Samples: 6
Max nTPM: 114.7
Min nTPM: 102.3
P10809_1018
114.7
P10809_1037
107.6
P10809_1056
102.3
P10809_1075
110.0
P10809_1094
102.9
P10809_1106
110.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
378.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 246.9
Samples: 4
Max nTPM: 336.2
Min nTPM: 188.9
RHH5202_R3573
251.5
RHH5230_R3602
211.1
RHH5259_R3631
188.9
RHH5288_R3660
336.2
Effector memory CD8 T-cell nTPM: 224.7
Samples: 4
Max nTPM: 321.1
Min nTPM: 165.3
RHH5203_R3574
321.1
RHH5231_R3603
196.2
RHH5260_R3632
165.3
RHH5289_R3661
216.2
MAIT T-cell nTPM: 253.3
Samples: 4
Max nTPM: 311.1
Min nTPM: 189.4
RHH5233_R3605
227.8
RHH5205_R3576
189.4
RHH5262_R3634
284.7
RHH5297_R3663
311.1
Memory CD4 T-cell TFH nTPM: 284.6
Samples: 4
Max nTPM: 330.1
Min nTPM: 240.7
RHH5300_R3666
330.1
RHH5236_R3608
240.7
RHH5265_R3637
313.6
RHH5208_R3579
254.1
Memory CD4 T-cell Th1 nTPM: 305.6
Samples: 4
Max nTPM: 402.8
Min nTPM: 165.4
RHH5210_R3581
402.8
RHH5302_R3668
383.3
RHH5238_R3610
165.4
RHH5267_R3639
270.9
Memory CD4 T-cell Th1/Th17 nTPM: 247.0
Samples: 4
Max nTPM: 330.8
Min nTPM: 165.9
RHH5303_R3669
330.8
RHH5211_R3582
266.3
RHH5239_R3611
165.9
RHH5268_R3640
224.8
Memory CD4 T-cell Th17 nTPM: 231.7
Samples: 4
Max nTPM: 321.4
Min nTPM: 160.6
RHH5304_R3670
321.4
RHH5212_R3583
209.7
RHH5240_R3612
160.6
RHH5269_R3641
235.2
Memory CD4 T-cell Th2 nTPM: 348.0
Samples: 4
Max nTPM: 386.7
Min nTPM: 309.6
RHH5305_R3671
386.7
RHH5213_R3584
345.5
RHH5241_R3613
309.6
RHH5270_R3642
350.3
Naive CD4 T-cell nTPM: 378.0
Samples: 4
Max nTPM: 490.3
Min nTPM: 321.4
RHH5306_R3672
490.3
RHH5214_R3585
321.4
RHH5242_R3614
344.0
RHH5271_R3643
356.4
Naive CD8 T-cell nTPM: 332.0
Samples: 4
Max nTPM: 481.2
Min nTPM: 138.5
RHH5201_R3572
481.2
RHH5229_R3601
138.5
RHH5258_R3630
356.0
RHH5287_R3659
352.1
Non-Vd2 gdTCR nTPM: 157.7
Samples: 4
Max nTPM: 197.3
Min nTPM: 73.0
RHH5235_R3607
73.0
RHH5264_R3636
168.7
RHH5207_R3578
197.3
RHH5299_R3665
191.6
T-reg nTPM: 290.7
Samples: 4
Max nTPM: 370.2
Min nTPM: 259.6
RHH5301_R3667
370.2
RHH5237_R3609
270.1
RHH5266_R3638
259.6
RHH5209_R3580
262.9
Terminal effector memory CD4 T-cell nTPM: 216.8
Samples: 2
Max nTPM: 275.8
Min nTPM: 157.7
RHH5243_R3615
157.7
RHH5272_R3644
275.8
Terminal effector memory CD8 T-cell nTPM: 202.5
Samples: 4
Max nTPM: 239.1
Min nTPM: 147.2
RHH5232_R3604
216.3
RHH5204_R3575
207.4
RHH5261_R3633
147.2
RHH5296_R3662
239.1
Vd2 gdTCR nTPM: 251.5
Samples: 4
Max nTPM: 281.0
Min nTPM: 217.9
RHH5234_R3606
281.0
RHH5206_R3577
245.8
RHH5263_R3635
217.9
RHH5298_R3664
261.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.